LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele24g0792	ATGAACGGAGGAAGAAACTCCAACAGGTTCCCTTTTACTCCATCACAGTGGCAAGAGCTTGAACATCAAGCTCTTGTTTTTAAGTACATGACTTCAGGTATTCCTATTCCTCCTGATCTCCTCTTCTCCATCAAAAGGGCTTCTTTAGATCACTCTCCTCTTTCTTCAAGGCTTATGTCTCTCCCACCTCATCACAACTTTGGGTGGAACTACTTGGAGATGGGGTTGGGAAGGAAGATAGATACAGAACCAGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGAGGTGTTCTAAAGAAGCTTACCCAAATTCGAAGTACTGTGAGAGACACATGCACAGAGGAAATAATCGTTTGAGAAAACCTCTCCAGCAACAAGGTTTCAAAACAACGTTAACCCCACCTACCAACAACAACAACAGAGATTCCTTAACAGTCACAAGAAGTAACAACACTGCTCCTCCTTCACTCTCCCTCACTACTACCACTCATTCATCGTCTTCATTCCACCACAATCATCATTCCTTCCTCTATAATAATCACCAACCTTCATCAAGATCTTCTTCATCTGGTTTCAGCTTCTCTTTACAAGATGATACTGCTTCTCACTTGTCAGTGAATTTTTCTTCTTCATGGAGTAGTGCTTATGCTTATGATGGGCTGAAAGAAGAGGTGGACGAGCATTCTTTCTTCACAGAGCCTTCTGGGACGATGAGAAGCTTCTCTGCTTCATCAATGGAAGATTCTTCGTGGCAACTTACGCCGCTGTCAATGAACTCATCGTATTCTTCTTCCTGGAAACAGAGGAGCTACTCTGGTTTGTCCACCGAGTACTCTTCTTACTTGCAGCTTCAAAACCAGACGAACCAGCAAGATCAAGATTGCTACAACATGCTGGGACTGGGAAAATCAGAAGAACCTCAGAATCACAAGACTGTTCATCGCTTCTTCGATGAATGGCCCAACAAAAGCAAAAACTCGTCGTGGCTTGATCTGGACGATAAATCATCCACCACCCAGCTTTCAATTTCCATTCCCACCATCACCTCTGATCAGCATGACCATTTTCCAAGCTTCAATTTCAGAACCCACCAAGATTCAAGATTCTGTCAGCAATTGGCAGAGCGCAACTGTGGAAGTGCTAGTTTGATACTTTCTTTAAGCCGGAGGATGCCTATCAAATGGGTTTTGCACTGGCAGCCCAACTCAGGAACTATGGTGAATAGCCAGATTCTTAATGAAGTTTCTCAGTGCGTCGAGAGCATCAATGGCGTCAAAGACGGAAGATGGAAAGCAACTCTAACATTCTATCGACCCAATTTACGAGACCAGTCGCTACAGGCCGAATTTCCGCGTGATTTTCTGGGGATATCGCTTCTTGAGCAACCTCACAAATACTACTTCATAATTCGCGGCCAGAGGATCGTTCTTGAAGCAGATTCTTCAATTCTGACTATAATGGAGAAGCTGCAATCGTACAAGTCCAAGGTGGCACTCAATTTTGAGGGAGTTTTGTATAAATTGGGTGACTTTCAGCTGAAAGTTGGAAAAGTTGCCCCCAATACTTCTGAAAGCCCGAGAGGAATTGTGATGGAGGTTGAGTATCTCCCCATTTCTTCCGTAGAGAAAGCCAGGCAAGTTATGGAAGAATTCCTTAATATATGGCGAGAAGTAGTGTCAAAAAAATCATTACCAGGTCAATTCATGCATGTGGAACCAAATTATGCAGAATATGGTCTGTTGGATAATTATACTTCGCAACATACTGCTGTTCAGTATGCTACTGCGTTGGCCCAACTGATTGCTACAGTGCAACAACCACCCTCGCAATCCATGAGGAGTTAG	1845	0.4369	MNGGRNSNRFPFTPSQWQELEHQALVFKYMTSGIPIPPDLLFSIKRASLDHSPLSSRLMSLPPHHNFGWNYLEMGLGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKPLQQQGFKTTLTPPTNNNNRDSLTVTRSNNTAPPSLSLTTTTHSSSSFHHNHHSFLYNNHQPSSRSSSSGFSFSLQDDTASHLSVNFSSSWSSAYAYDGLKEEVDEHSFFTEPSGTMRSFSASSMEDSSWQLTPLSMNSSYSSSWKQRSYSGLSTEYSSYLQLQNQTNQQDQDCYNMLGLGKSEEPQNHKTVHRFFDEWPNKSKNSSWLDLDDKSSTTQLSISIPTITSDQHDHFPSFNFRTHQDSRFCQQLAERNCGSASLILSLSRRMPIKWVLHWQPNSGTMVNSQILNEVSQCVESINGVKDGRWKATLTFYRPNLRDQSLQAEFPRDFLGISLLEQPHKYYFIIRGQRIVLEADSSILTIMEKLQSYKSKVALNFEGVLYKLGDFQLKVGKVAPNTSESPRGIVMEVEYLPISSVEKARQVMEEFLNIWREVVSKKSLPGQFMHVEPNYAEYGLLDNYTSQHTAVQYATALAQLIATVQQPPSQSMRS	614

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele24g0792	614	MobiDBLite	consensus disorder prediction	119	166	-	-
	Lele24g0792	614	Pfam	TATA-binding related factor (TRF) of subunit 20 of Mediator complex	391	597	IPR013921	GO:0003712\|GO:0006357\|GO:0016592
	Lele24g0792	614	SMART	QLQ_2	10	46	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Lele24g0792	614	ProSiteProfiles	WRC domain profile.	81	125	IPR014977	-
	Lele24g0792	614	MobiDBLite	consensus disorder prediction	116	166	-	-
	Lele24g0792	614	Pfam	WRC	83	122	IPR014977	-
	Lele24g0792	614	ProSiteProfiles	QLQ domain profile.	11	46	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Lele24g0792	614	Pfam	QLQ	11	44	IPR014978	GO:0005524\|GO:0005634\|GO:0006355
	Lele24g0792	614	PANTHER	UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49	396	605	IPR013921	GO:0003712\|GO:0006357\|GO:0016592

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele24g0792	Lele-ChrLele24	5331134	5336408	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele24g0792	4	125	GRF Transcription Factor Family	AT3G13960	68.033	7.94e-52	181

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRF	Lele24g0792		Med20	7.3e-41	CL0273