Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0746 ATGGGTGGGTGTTTTCCTTGTTTTGACGAGGAGGACAGCGGGGTGAAGAAGGAAGTGGTCAAGAAAGATTCTGTTAAAGAAGGATCAGCTGCTCAGTCTCATCACGTCAATAGGGTTAGCTCAGATAAGTCAAAATCAAAAAGTGGCTCTGATTCTAAGAAGGAACTACCAGTTCAAAAGGATGGAACAACTGCCCACATTGCTGCACAAACTTTTACCTTTCGAGAGCTTGCAGCTGCCACAAGGAATTTCAGGCCTGAATGTTTATTAGGTGAAGGTGGTTTTGGACGTGTTTATAAAGGCCACCTTGAAAGCACAGGGCAAGTTGTTGCTGTAAAACAGCTTGACCGCAATGGCCTTCAAGGAAATCGAGAGTTTTTGGTGGAGGTGCTCATGCTTAGCCTCTTGCATCACTCAAATCTTGTGAGCTTAATCGGTTATTGTGCTGATGGAGATCAGCGGCTGCTTGTCTATGAGTTTATGCCTTTGGGGTCTTTGGAGGATCACCTACATGATCTTCCTCCTGACAAGGAGCCTTTGGACTGGAATACAAGGATGAAAATAGCAGCTGGAGCGGCAAAGGGGTTGGAATATTTACATGACAAAGCAAACCCTCCTGTAATATATAGAGACCTAAAATCATCCAATATCCTGCTAGACGAGGGTTTTCATCCAAAGTTATCAGATTTTGGGCTAGCAAAACTCGGTCCAGTTGGTGATAAGACTCATGTATCGACACGAGTAATGGGAACATATGGTTATTGTGCCCCAGAATATGCTATGACTGGACAGCTAACTCTTAAGTCTGATGTCTACAGTTTTGGAGTTGTTTTCCTGGAACTTATTACTGGGCGCAAGGCTATTGATAATACACGTGCACATGGCGAGCATAATCTTGTGGCATGGGCACGACCTCTGTTTAAAGACCGTAGGAAGTTCCCCACAATGGCTGATCCTCTGCTTCAAGGCCGTTATCCAATGCGAGGACTCTATCAAGCACTTGCAGTTGCAGCTATGTGTTTGCAAGAACAAGCTGCTACAAGGCCTCTTATTGGAGACGTTGTGACAGCTCTTACATACTTGGCCTCACAGACATATGATCCAAATGGATGTGGTCAAACTAGCCGAGCTGGTCCATCAACCCCGAGGAGCAAGGAGGATCGAAGGAACATGGCAGATAGCTCGGATAGCCCTGATCACGGACGATATCGTGGATCACCTTCCACCCATAGAAACTCACCCGATTACAGGAAGAGAGATGGTAGGGATCCAAGTTCTGGGACAGGCTTGGGAAGGATTGAAACTGGTGGAGGTTCAGGAAGAAGATGGGGATTGGATGATGGAGAAAGGCAGGACTCTCAGAGAGACAGCCCTGTAGGTGCTGGTGGAAGAGCTAGGGAAACTCGGAGGAACCGTGACCTTGACAGGGAATGTGCAGTTGCAGAAGCAAAAGTTTGGGGAGAAAATTGGAGAGAGAAAAAGCGGACAAATGCAATGGGAAGCTTCGATGCTACAAATGAGTGA 1524 0.4646 MGGCFPCFDEEDSGVKKEVVKKDSVKEGSAAQSHHVNRVSSDKSKSKSGSDSKKELPVQKDGTTAHIAAQTFTFRELAAATRNFRPECLLGEGGFGRVYKGHLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHSNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPTMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNGCGQTSRAGPSTPRSKEDRRNMADSSDSPDHGRYRGSPSTHRNSPDYRKRDGRDPSSGTGLGRIETGGGSGRRWGLDDGERQDSQRDSPVGAGGRARETRRNRDLDRECAVAEAKVWGENWREKKRTNAMGSFDATNE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0746 507 Pfam Protein kinase domain 89 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0746 507 MobiDBLite consensus disorder prediction 366 380 - -
Lele24g0746 507 FunFam Serine/threonine-protein kinase PBS1 57 160 - -
Lele24g0746 507 FunFam Serine/threonine-protein kinase PBS1 161 376 - -
Lele24g0746 507 Gene3D Transferase(Phosphotransferase) domain 1 161 371 - -
Lele24g0746 507 CDD STKc_IRAK 90 359 - -
Lele24g0746 507 SMART serkin_6 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0746 507 PANTHER OS07G0668900 PROTEIN 4 369 - -
Lele24g0746 507 MobiDBLite consensus disorder prediction 19 60 - -
Lele24g0746 507 Gene3D Phosphorylase Kinase; domain 1 54 160 - -
Lele24g0746 507 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Lele24g0746 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Lele24g0746 507 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0746 507 Coils Coil 464 484 - -
Lele24g0746 507 MobiDBLite consensus disorder prediction 366 475 - -
Lele24g0746 507 MobiDBLite consensus disorder prediction 38 60 - -
Lele24g0746 507 MobiDBLite consensus disorder prediction 381 425 - -
Lele24g0746 507 SUPERFAMILY Protein kinase-like (PK-like) 66 358 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0746 Lele-ChrLele24 5004078 5010088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0746 4 363 Glycoside Hydrolase AT3G07070 65.301 3.40e-169 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele24g0746 Pkinase 5.2e-45 CL0016