Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0741 ATGGAATCGAATCGCCGGCGAACGACGCGGCGGAGGAGGGAGCAGGAGGACCTAGTGAGGAAAGTAATCTGGCTTTCAATTCGGGGGCATTCTTGTCCGATATGTTTCAGAAGCCTCGAAGACCATTATAAGGAAGCTGCGATTCTCTCCGTGTGTATGCATGCCTACTGTATCGAATGTATTCGCAAATGGAGTGACTTGAAAAGAAAGTGTCCTCTCTGTAATGCAAACTTCAGCTCCTGGTTCTGTAAACTCAGTCTTTCCTCTAGAGAGTTCCAGAAAGAGGCGTTGCCCTTTGAAGGTTCGACCGGAAATTCTCATCAAGAAATTAGCTCAAGCCATCTAGATGCTCGTAGACTTCTTCGTAGAACAAGAGTTGCTTTAGATGAAAGGAAAACGAGGGCACTGCCATGGCGGCGATCATTTGGACGTCCTGGACATGCGAGTCCAGAAGTTATTGCTCAAAGGAAACTTGATTGGCGTGCAAGGATATACAAGAAGCAGCTGAAGGCTGTTCCTTTAACCTCTAGATATCTTGAGCAGATTAATCCAAGAAATAGTTTTTTAAGAGAAAAAACACTACAAAAGATTGAGCCATGGATACGGAGGGAGCTACAAGCCGTGCTTGGTGACCCAGATCCAACTGTCATAGTTCATATGGCAACCTCACAGTACTTTGCATGGCTGGAAGAGAAAGTTAGGTCTGGACAGTTTGATGCTGAAGAGAGGTTTATATCACCCCTGCGTCCTTTCCTGCAAGATAAAGCTATAATCTTTTGGCATGAGCTAAGGTGTTATGCTGAGAGTGGTTACAATATTGAAACATATGATGCTGTAGTTGAGTACAAAAACCTGGAGTAA 861 0.446 MESNRRRTTRRRREQEDLVRKVIWLSIRGHSCPICFRSLEDHYKEAAILSVCMHAYCIECIRKWSDLKRKCPLCNANFSSWFCKLSLSSREFQKEALPFEGSTGNSHQEISSSHLDARRLLRRTRVALDERKTRALPWRRSFGRPGHASPEVIAQRKLDWRARIYKKQLKAVPLTSRYLEQINPRNSFLREKTLQKIEPWIRRELQAVLGDPDPTVIVHMATSQYFAWLEEKVRSGQFDAEERFISPLRPFLQDKAIIFWHELRCYAESGYNIETYDAVVEYKNLE 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0741 286 ProSiteProfiles Zinc finger RING-type profile. 32 75 IPR001841 -
Lele24g0741 286 SUPERFAMILY RING/U-box 31 81 - -
Lele24g0741 286 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Lele24g0741 286 Pfam Ring finger domain 31 75 IPR001841 -
Lele24g0741 286 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 12 284 - -
Lele24g0741 286 SMART ring_2 32 74 IPR001841 -
Lele24g0741 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 136 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0741 Lele-ChrLele24 4967991 4970181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0741 8 263 C3H Transcription Factor Family AT2G39100 46.642 9.75e-75 228