Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0737 ATGCCAAGCTCTAGATCAGCAGCCTCTGAGAACAAAACCCAGATGATGATGGGCTTGTCTCTTAAAACCAACCAATCTTGTTTTGGTGAGAGAAGAGGAAGAAGAAAGCAAGGAGAAGCAGGAAGGTTTCTTGGAGTAAGAAGAAGACCTTGGGGAAGATATGCTGCAGAAATTAGAGACCCCACAACTAAAGAAAGACACTGGCTTGGCACTTTTGATACTGCTCAAGAAGCTGCTTTAGCTTATGACAGAGCTGCTTTGTCCATTAAAGGAAGCCAAGCAAGAACCAACTTTGTTTACACTGACATCAATAATACAACCTTTGACAATGCTCTTCTTTGTCCCTTTGATGTTCAGCTTCATCAGTCACTCTTTAACACTGCTCAGATGAAACAGTCAACCAATCAGAACAGCCCACCACCTCATCTTTCTTCTGAGAATTCCCAGGTTAAGACTACTGCTGCATGTGATAATAACAACTTCTTCAACAATGATGATTCTAAATCAGGTTACTTGGAATGCATAGTTCCCGATGTCTGTTTCAGACCACCTTCTTCTTCTTCCAATGATAGCAAAAGTGACCAGAAGATATCTCAAGAAGCTGTGAAGAAGAACATGGCCTCGTCAAGCTCTGGAGATTTCATTTATCCAATAAATGAACTTATTGGTCAAGAAACAAGCTGGGATTGGAGCTGCAGTGAACTTGCTGCTATATTCAACAGTCCATTAAAGGTTGAAGAAACTTCATCAATCACTTATGCTCCATCACTTCCTTCATTTGATGTTGATTTGGCTTACACACTCTTCTGA 810 0.4086 MPSSRSAASENKTQMMMGLSLKTNQSCFGERRGRRKQGEAGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSIKGSQARTNFVYTDINNTTFDNALLCPFDVQLHQSLFNTAQMKQSTNQNSPPPHLSSENSQVKTTAACDNNNFFNNDDSKSGYLECIVPDVCFRPPSSSSNDSKSDQKISQEAVKKNMASSSSGDFIYPINELIGQETSWDWSCSELAAIFNSPLKVEETSSITYAPSLPSFDVDLAYTLF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0737 269 CDD AP2 42 98 IPR001471 GO:0003700|GO:0006355
Lele24g0737 269 SUPERFAMILY DNA-binding domain 43 99 IPR016177 GO:0003677
Lele24g0737 269 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Lele24g0737 269 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Lele24g0737 269 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Lele24g0737 269 MobiDBLite consensus disorder prediction 184 204 - -
Lele24g0737 269 FunFam Ethylene-responsive transcription factor 2 42 100 - -
Lele24g0737 269 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 208 - -
Lele24g0737 269 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Lele24g0737 269 MobiDBLite consensus disorder prediction 130 150 - -
Lele24g0737 269 Pfam AP2 domain 45 91 IPR001471 GO:0003700|GO:0006355
Lele24g0737 269 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0737 Lele-ChrLele24 4940993 4941802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0737 29 184 AP2-EREBP Transcription Factor Family AT5G18560 44.231 1.30e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele24g0737 AP2 2.8e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0768 21 5036258 5037142 Lele24g0737 24 4940993 4941802 hybridization
Lele22g0750 22 4909852 4910664 Lele24g0737 24 4940993 4941802 hybridization