Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0721 ATGTCTTGTTCTGAAGGAGAACTTGAAATAAGTTTTGGCTATCAATGCAATATTAACAGAGTTTCCTCTTCTAATTTAATCGATAACTATAAAATCCTGCCTGTACTCCGTAAAACAAGCAGCTTCTCTTGCTTGTCTGGTGCCGCCTTAAGTGCCAATGCTACATTAGCCAACACTAACATCTGCGATGGTTTGATAGGAAGAGAAATTCTTCGAAGCTGGGACTCCCCTAATATGTTTCGTAAGGTAGCCTCTTCTTCAAGCATTTCCAGGTTGGATATGTTGTCATCTTCTCTCCAAAGCACTTTGTCAAATTTAAGTAGCTGTCCATCCACCCCAAGTAATATGCTTGAACATGACTCTTGCACAATAAAATCCCCGATCTCTCCCTCCAGAAGTGAAGGTTTTCTTAATGCTATGGACGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTTTTTTGTGCTATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCCGGTACTCTGTTTGACACCATTTCATCTTATTTTAGAAAGTTATATTCTGAATTGGAGCCAGATTCTTTCAGTACTTATAACAATATGGGTTTGGATGGATCAGTCCAACATAAGTTGGAGGATAGCCTTCATAATTGTGACGAACAATCATTTTCAGATGGGGTACTTGATTGCCTGCAGCGTGCTCTTAGTCAGGTTGAGAATGATTTCTTACACATGGTTGAGCAAGAAATAGAGGATCGCCCAGACTTGGTTTCAATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTATATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACGAGCAGTTGTGAATCAAATGGGGGTGGAAAACTTAAAGCTATCCAGCTGACAGATAGTCACACTGTTGAAAATCAAGCTGAAAGAGCCCAGCTTCTGGCTGATCATCCTGCTGATCCTAGGACCATTATATCAGGAAGAGTGAAAGGAAAACTGAAGGTTACTCGCGCAGTTGGAGTTGGCTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGAATCCTTCGGGTTCGTGATCTTGTAAGCCCTCCATATATTTCCGCTGAACCATCATTAGGCGTACATAAGATCTCAAGTTCTGATCATTTCGTCATAGTGGGGAGTGATGGTTTATTTGATTTCTTCAACAATGACGAGGCAGTGGAGCTTGTAGAGTCCTATATCCAGACCAATCCTTCTGGTGATCCAGCAAAGTTTCTTGTCGAGCAGCTTGTATTCAAAGCCGCTGATTGTGCAGGTTTCAGCATGGAAGAGTTGATGAATATACCAGCAGGAAGGAGGAGGAAGTACCATGACGATGTAACTGTAATTGTGATCATTCTTGGCACCAATCAGCGGACTTTAAAGGCATCAACTTGTGTATGA 1479 0.4158 MSCSEGELEISFGYQCNINRVSSSNLIDNYKILPVLRKTSSFSCLSGAALSANATLANTNICDGLIGREILRSWDSPNMFRKVASSSSISRLDMLSSSLQSTLSNLSSCPSTPSNMLEHDSCTIKSPISPSRSEGFLNAMDVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFRKLYSELEPDSFSTYNNMGLDGSVQHKLEDSLHNCDEQSFSDGVLDCLQRALSQVENDFLHMVEQEIEDRPDLVSIGSCVLLVLLHGNELYTLNLGDSRAVLATSSCESNGGGKLKAIQLTDSHTVENQAERAQLLADHPADPRTIISGRVKGKLKVTRAVGVGYLKKKSLNDALMGILRVRDLVSPPYISAEPSLGVHKISSSDHFVIVGSDGLFDFFNNDEAVELVESYIQTNPSGDPAKFLVEQLVFKAADCAGFSMEELMNIPAGRRRKYHDDVTVIVIILGTNQRTLKASTCV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0721 492 Gene3D - 113 487 IPR036457 -
Lele24g0721 492 SUPERFAMILY PP2C-like 149 480 IPR036457 -
Lele24g0721 492 ProSiteProfiles PPM-type phosphatase domain profile. 136 479 IPR001932 -
Lele24g0721 492 CDD PP2Cc 149 479 IPR001932 -
Lele24g0721 492 Pfam Protein phosphatase 2C 217 430 IPR001932 -
Lele24g0721 492 PANTHER PROTEIN PHOSPHATASE 2C 134 477 IPR015655 GO:0004722|GO:0006470
Lele24g0721 492 SMART PP2C_4 130 477 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0721 Lele-ChrLele24 4811538 4813500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0721 6 492 PP2C-type Phosphatase Gene Family AT3G16560 62.097 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0744 21 4887126 4891874 Lele24g0721 24 4811538 4813500 hybridization
Lele22g0727 22 4774351 4776402 Lele24g0721 24 4811538 4813500 hybridization