Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0716 ATGGAGGATTCCGTAGGGCAAAAGAAGAACAACCGTGAGTTTACTTTGGTGTCAGTTGCTGAGCTCTCTTCGCCTGCTTCGTCGGCTTCGCCGGGTATTGCTCGCTTCACTTCCGACGGTCCCGTGGCGCAGCTGCAAATTCATCAAGATTCTCGCCAGATTGATATCGATGTTGATCTTCGAACTGCTCAGATATTCAAATTAGGCCCTGTTCAATCAGTTTGCATGGTCGAAGGGTCTGTTGTCGATGGCAAGACATTATTCTCAAGGGGAATATCTATTCAGTTTGGAAATGAGGAGGAAAGTGGGGACTTTTATAGTGCATTCCAGCAATGGAAGAAGGAAGCGAATGCTCAAGATTCTGGTAGAAGCTTACCAAATGGAATTATACCGAGTTCTAAAAGTAAATTTGATGAGAAGATAGAGCCATCTTCTGCAAAAATGTATTTCCATTATTATGGGCAGCTTCTGCATCAGCAAAATATGTTGCAAGACTATGTTAGAACAGGAACCTATTATGCTGCAGTTATTGAGAACCGTGCCGATTTCATGGGTCGCGTAGTAGTTGATGTTGGTTCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAGGCATCTGAAATGGCAGAATACGCACAGAAACTCATAGCTGGAAACCCAATTCTCGGTCAACGAATTACAGTGATCAAGGGCAAGGTTGAGGATGTAGAATTGCCTGAAAAAGCAGATATTTTGATCTCTGAGCCCATGGGAACCTTGTTAGTAAATGAAAGGATGTTGGAGTCATATGTCATTGCTAGAGATAGGTTTCTCACTCCTGAAGGGAAAATGTTTCCCACGGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATGTGTTTATCGAAATTGCTAGTAAGGCCTTGTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACTCCCTTGTATGACACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATAGCTCCTCCTATGTTCCATGTGTTAGACTTCACAAAAATAAAGGAAGAAGAGCTGTATGAAATAGATATACCTTTAAGATTCGTAGCCTCTGTGGGTGCACGAGTACATGGGCTGGCTTGTTGGTTTGATGTACTGTTTAATGGAAGTACCGTGCAAAGATGGCTTACGACTGCCCCAGGGTCACCAACAACCCACTGGTACCAGTTGCGCTGTGTTCTTTCTCAGCCAATTTATGTCATGGCGGGACAAGAAATTACTGGCAAGCTCCACATGGTTGCTCACAATGCCCAAAGCTATACGCTATATTTAACATTGTCAGCTAAAATGTGGGGAGGGATTCTTCAAACCTCCTCTTGCAAATTTGATTTGAAAGAACCCTACTATAGAATGTCTCAACCGCAAGCTTACACATTAGCCCAAGACCAGCAACAACCACCACTTTTACACACACAGGACATACCAATTCAATCGCAAGATTTAGATGAACCTGAGATGATGCAACAACCGTCGCCTAATTCATGTGCTCAGGTTAATTCATTGATGCAGAATATTTAA 1608 0.4272 MEDSVGQKKNNREFTLVSVAELSSPASSASPGIARFTSDGPVAQLQIHQDSRQIDIDVDLRTAQIFKLGPVQSVCMVEGSVVDGKTLFSRGISIQFGNEEESGDFYSAFQQWKKEANAQDSGRSLPNGIIPSSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFMGRVVVDVGSGSGILSLFAAQAGAKHVYAVEASEMAEYAQKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPEGKMFPTVGRIHMAPFTDEYVFIEIASKALFWQQQNYYGVDLTPLYDTAFQGYFSQPVVDAFDPRLLIAPPMFHVLDFTKIKEEELYEIDIPLRFVASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGKLHMVAHNAQSYTLYLTLSAKMWGGILQTSSCKFDLKEPYYRMSQPQAYTLAQDQQQPPLLHTQDIPIQSQDLDEPEMMQQPSPNSCAQVNSLMQNI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0716 535 MobiDBLite consensus disorder prediction 117 136 - -
Lele24g0716 535 MobiDBLite consensus disorder prediction 117 131 - -
Lele24g0716 535 FunFam Probable histone-arginine methyltransferase CARM1 129 289 - -
Lele24g0716 535 CDD AdoMet_MTases 188 291 - -
Lele24g0716 535 Gene3D Vaccinia Virus protein VP39 130 289 IPR029063 -
Lele24g0716 535 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 142 457 IPR025799 GO:0016274|GO:0018216
Lele24g0716 535 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 462 IPR029063 -
Lele24g0716 535 Gene3D - 291 493 - -
Lele24g0716 535 FunFam Probable histone-arginine methyltransferase CARM1 291 493 - -
Lele24g0716 535 MobiDBLite consensus disorder prediction 512 535 - -
Lele24g0716 535 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 112 473 IPR025799 GO:0016274|GO:0018216
Lele24g0716 535 Pfam Ribosomal protein L11 methyltransferase (PrmA) 185 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0716 Lele-ChrLele24 4777082 4782586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0716 149 439 C2H2 Transcription Factor Family AT3G12270 33.010 5.18e-38 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0740 21 4840043 4845453 Lele24g0716 24 4777082 4782586 hybridization
Lele22g0721 22 4740438 4745968 Lele24g0716 24 4777082 4782586 hybridization