Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0708 ATGGACGGTAATAAGGATGAAGCTTTGAGGTGTATTCGCGTCGCTGAGGAGGCGATTGCAACCGGGAACAAAGAGCGGGCCCTTAAATTTATCAAAATTGCACTACGGCTGAATAACAATCTGTCAGTGGATGAGCTACTTACCATGTGTGAGAGGCTTGGTTCTGAATCATCTACGCCTTCTATGGTTGAAACCGTTGACCATCAGGCTAAGAGGGAGCATGGTTCAAGACGAAGTGATGATGGATTGAATGGAGAGAGAAATTATACAGAGGAACATGTTCAGTTGATTAGGGAGATCAAGGGGAAGAACGATTATTATGCCATTCTTGGTGTGGAGAAGACTTGTTCTGTTGATGAGATTAGGCGGGCTTATAGGAAATTGTCTTTGAAAGTTCATCCTGACAAGAATAAGGCACTGGGTTCTGAAGAGGCATTTAAGAAGGTATCCAAGGCTTTTAGGTGTTTAAGTGATGATGGTTCAAGGAGACAGTATGATCAGACAGGGCTGGTTGAGGAGTTTGAATACAACCAGCGGCACAATGTTAGGCGCAGGAGAAGAAGGACAACTACGCATGACTTTTTTAATGATGACATTGATCCTGATGAGATATTTAGGGCATTCTTTGGAGAAGCTGATGTATTTGGTAGAGGTCATGTTTACCGGACAAGGGGAATGGGTGGTCACCAGCGGCAAGAGTTTCAAGGTGGAGGGCTCAATGTTATGCTCCTTCTGCAACTTGTACCGTTCTTGATAATATTTTTGCTTGCATACTTGCCATTTTCTGAACCAGACTATTCTTTGCGTAAAAATCACTCATATTATATTCCCAAGACGACCGAGAAGTATGAGATTGATTTTTTTGTGAAATCTGAATCATTTGAAGCTAAATATCCACATGGAAGTCCTGCCCGTGCAAGTATTGAAGGCAGTGTGATACATGATCACAAAAACTTGCTTCGTCGCTACTGTCAAATAGAACTCCAGAGGCGTAGTTGGAATAGGAATCTACCAACTCCTTACTGTGAAAAGCTTCAGAAGCTTGGCGTAGTAGCTTGA 1059 0.4268 MDGNKDEALRCIRVAEEAIATGNKERALKFIKIALRLNNNLSVDELLTMCERLGSESSTPSMVETVDHQAKREHGSRRSDDGLNGERNYTEEHVQLIREIKGKNDYYAILGVEKTCSVDEIRRAYRKLSLKVHPDKNKALGSEEAFKKVSKAFRCLSDDGSRRQYDQTGLVEEFEYNQRHNVRRRRRRTTTHDFFNDDIDPDEIFRAFFGEADVFGRGHVYRTRGMGGHQRQEFQGGGLNVMLLLQLVPFLIIFLLAYLPFSEPDYSLRKNHSYYIPKTTEKYEIDFFVKSESFEAKYPHGSPARASIEGSVIHDHKNLLRRYCQIELQRRSWNRNLPTPYCEKLQKLGVVA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0708 352 MobiDBLite consensus disorder prediction 66 87 - -
Lele24g0708 352 PRINTS DnaJ domain signature 125 140 IPR001623 -
Lele24g0708 352 PRINTS DnaJ domain signature 141 161 IPR001623 -
Lele24g0708 352 PRINTS DnaJ domain signature 107 125 IPR001623 -
Lele24g0708 352 ProSiteProfiles dnaJ domain profile. 105 169 IPR001623 -
Lele24g0708 352 SMART dnaj_3 104 161 IPR001623 -
Lele24g0708 352 Gene3D DnaJ domain 101 220 IPR036869 -
Lele24g0708 352 SUPERFAMILY Chaperone J-domain 102 220 IPR036869 -
Lele24g0708 352 Pfam Domain of unknown function (DUF1977) 262 332 IPR015399 -
Lele24g0708 352 Pfam DnaJ domain 105 166 IPR001623 -
Lele24g0708 352 MobiDBLite consensus disorder prediction 57 87 - -
Lele24g0708 352 CDD DnaJ 105 158 IPR001623 -
Lele24g0708 352 PANTHER AT29763P-RELATED 1 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0708 Lele-ChrLele24 4728336 4729394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0708 106 166 C2H2 Transcription Factor Family AT1G74250 44.776 7.56e-08 52.0