Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0699 ATGGCAGTCCTAACGCTCAGTCACATTGCCCTTTCACTCGCTACTTTCTCTCTATTCGCAATATCTCATACAGCTCCTTTGCCTAAATATTCTTTCAGTTGGTGGGATGATAGGGACACATTTAGGCCCGGCGAGACGGGAGCGATCAAGGTCACCGTACTCGAAAACGCCGACAAGATCGACAGAACTGCTTTTAAGCCCAGGTTCACCGTGAACGAAAAATCAGGGAATAGTTCCTACGTATCTTCGGTGTTCACAAATTTGGAAGGTGACCCAAATAATTGGAGCATTACGTTTACTCCTATTAGGGTTGGAGGATTTAATGTGCTCATCCACGAAGGCCATTATCAAGTTTATGATTCATCCTTGCACTACCGAGTTGAACCAGGGAACATGCATCCATCAGTGTGTGTTGCTTTATGGAAGGGACTGAGAAATGAGTTTGAAGCTGGTGCGAAAGCTACAATTATGATACTCCTTAAACATGCATTTGGGAACAATATCTCTCGTTCAACAGAAGTTTCCTATTTACCAGACTTTAATTTGTCTTTGCTTTATGAAAATGGTTCCTTTGCTGGCGCACTAATCATCAGCAACATCGGCTGGAACGAGTTTGATTATATGACTCTTGAGTTTATTGTCACAAAAGCTGGCAACTTCTCATTGCTTGTAGAAGGAGGAAATCAAACATTGAACGGTTCTCCATTACCATTGAAGGTGAACCCAGGACCTATAGATGTCTCAAACTGTATTGCTCAATGGAACTTTAAACCAAAAGCATGGCAATTGGCTTCGAAGATGGAAATTCTGATACATCAGCAAGATCAGTACCGAAATCTGGTTCCTGGATTGAAGCAGTACAACTTCAAGAGGGAAGTAAATATGTTATTTTCAGGTGTTGTGGTGTGTTCTCAAAAGGTGACAAAGCTCTCTAAAATTGAAATAGTAGTGTATCTGGTGGATTCATTTGCAAACCCTGTCCTGTCACAACAATCAAGGTTGAAATTGGATATTACTTCAATTAATAGTTCTGGATTTTCAACTTGGGACGTTGTGGATTATAAGGATGGTTCTTATGGCTGCTATCATATGGCTAAAGATGTTGGCTTACGAGATTTGTGTTTCCATGCAACCCCAGAACATGGTTCACTTATACAGAATGGAAGGATTTTTCGTCATACTCCTTATGAACATTATTATGGAACTGATTCTTTTTGGTACACTATATCTGATATCCACCGAAATATAGTCACTGCTTCTGTGTATTTATCTGTTCTCAATCTCCCACCTCAGTTTGCTTCTGTTCCAAGTCAACTGCAAGCAACAGAAGATCTGATTAGTCCTAGATTTAATGGAAAGCATTTCTGTCAACCTGAGTGGAAGATCTGGAAGTATACTTCTGTCACTCAAGTCAGCACTCAGCAGAAGCTTCTCCCACATATAGCTCACCCCTCACACTCCTTCCTTCATCCCCATCCAACTCAACAAACAATGGCTGCCAATGACGATCCCAATCGCAATCCCTTCGACGCCAAAGGCTATGAGCTCACCACCAACGTCCTCCTCACCATCACCCTCGTCTTGTTCTTCCTCGTCATCCCCCTCATTTCCCTCCACTTCTACGCCCGCTGGTACCTCCGCCGTGCTCGCCTCCGTCACCGCCAGCGCCGCCGTTCATATCTCGTCTTCTACGTCGACTCCGAATCCCCCGCACCCGTCGGTCTCGACCCCTCTATCATTCAGTCTCTCCCTGTCTTCGTTCATTCCGCCCACTCCGACCCCGTGGAATGCGTTGTCTGCCTGTCCGATTTCCAAGAGAGCGAATCGGGTCGGGTTTTGCCCAAATGTAACCATACTTTTCACGTCGAATGCATCGACATGTGGTTCCAGTCCCACTCAACTTGCCCGCTCTGTAGATCTTTGGTTGAATCCGTCCCCTCCGGGGATCCAGTGGTGATCGATGTGTGCGAACCGGGTTCAAGTTCAGGGTGTCGTCAGGATGGAGAAGAAGAGAACCGAAGCGGCCGGACACTCTGCTCTTCGTCGTCTTCGATTGGATTGAGGCGAAAGCCGTCGTCCGTGGGTGTGTCAATTGACATGCCATTGAGCAGAAGCTTCGGGAGAGAGGCGGAGGGGTCGACGACGTCGATTAGGTCACCAGGGGTTCGTATGCTATCTTTCAAGAGAATACTGAGCAGAGAGAGAAAGCCAAGTCCTTCGTCCCCGTCGTCGGAAAACTGTGGCGTTGGATGCAGCTCCGTGGCCGAGATAGAGACGAGTCAGTGA 2286 0.4637 MAVLTLSHIALSLATFSLFAISHTAPLPKYSFSWWDDRDTFRPGETGAIKVTVLENADKIDRTAFKPRFTVNEKSGNSSYVSSVFTNLEGDPNNWSITFTPIRVGGFNVLIHEGHYQVYDSSLHYRVEPGNMHPSVCVALWKGLRNEFEAGAKATIMILLKHAFGNNISRSTEVSYLPDFNLSLLYENGSFAGALIISNIGWNEFDYMTLEFIVTKAGNFSLLVEGGNQTLNGSPLPLKVNPGPIDVSNCIAQWNFKPKAWQLASKMEILIHQQDQYRNLVPGLKQYNFKREVNMLFSGVVVCSQKVTKLSKIEIVVYLVDSFANPVLSQQSRLKLDITSINSSGFSTWDVVDYKDGSYGCYHMAKDVGLRDLCFHATPEHGSLIQNGRIFRHTPYEHYYGTDSFWYTISDIHRNIVTASVYLSVLNLPPQFASVPSQLQATEDLISPRFNGKHFCQPEWKIWKYTSVTQVSTQQKLLPHIAHPSHSFLHPHPTQQTMAANDDPNRNPFDAKGYELTTNVLLTITLVLFFLVIPLISLHFYARWYLRRARLRHRQRRRSYLVFYVDSESPAPVGLDPSIIQSLPVFVHSAHSDPVECVVCLSDFQESESGRVLPKCNHTFHVECIDMWFQSHSTCPLCRSLVESVPSGDPVVIDVCEPGSSSGCRQDGEEENRSGRTLCSSSSSIGLRRKPSSVGVSIDMPLSRSFGREAEGSTTSIRSPGVRMLSFKRILSRERKPSPSSPSSENCGVGCSSVAEIETSQ 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0699 761 SUPERFAMILY RING/U-box 591 645 - -
Lele24g0699 761 Pfam Ring finger domain 596 639 IPR001841 -
Lele24g0699 761 SUPERFAMILY E set domains 132 250 IPR014756 -
Lele24g0699 761 SMART ring_2 597 638 IPR001841 -
Lele24g0699 761 MobiDBLite consensus disorder prediction 659 699 - -
Lele24g0699 761 CDD RING-H2_EL5_like 596 639 - -
Lele24g0699 761 Gene3D - 348 422 - -
Lele24g0699 761 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 512 646 IPR044675 -
Lele24g0699 761 MobiDBLite consensus disorder prediction 675 690 - -
Lele24g0699 761 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 564 644 IPR013083 -
Lele24g0699 761 ProSiteProfiles Zinc finger RING-type profile. 597 639 IPR001841 -
Lele24g0699 761 MobiDBLite consensus disorder prediction 736 761 - -
Lele24g0699 761 Gene3D Immunoglobulins 130 241 IPR013783 -
Lele24g0699 761 MobiDBLite consensus disorder prediction 732 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0699 Lele-ChrLele24 4636475 4641900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0699 504 742 Rapid Response to Elicitors AT3G16720 45.290 3.24e-51 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0699 24 4636475 4641900 Lele24g0699 24 4636475 4641900 ECH
Lele21g0718 21 4694288 4695103 Lele24g0699 24 4636475 4641900 hybridization