Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0697 ATGGCTGTTATTTCGTTATCTGGGATCCTCCTAGTGGCCATGGTAGCGGTTGCGTCGGCGGAGGATCACGGTCATTTATCGGTGTCTCAAAAGAACGTGGACATGCTCTGCAGTTCAACCCAATACAAAGAAACCTGCCAGCACAGCCTCAGAAAAGCATCCAACGGCACCACTGACGTTAAAGAACAGATCAAAGCCACCTTCCACGCCGCCGCCAAGGAGTTCAAGAAGTTCATCGACAACTCCACCCTCTTCCAAGAGCTTGCCAAGGACAACATGACCAAACAGGCCATGGAAATCTGCCACGAGGTGCTAGATTACGCCATTGACGACGTCAGGAACTCCATCGATAGCGTGGACCAGTTCGATATAAGCAAGCTCGGTGAATACGCTTACGACGTTAAGGTGTGGCTCGGAGGCACTATCTCCCACCAACGCACCTGCTTGGACGGCTTCGAGAACACCACCACTCACGCAGCAGAGACCATGGCCAAGGTGTTGAACACCTCCCTCGAGCTCAGCAAGAACGCTTTGGACATTATTTCTGGCCTCTCCGACATTGCCCAAGCCTTTGGATTCGTCGGTTTTGGCTTCGGTGGCCTGCAGCAAGATCATGCTGATAACAACACCGGCGGCCAGCAAGCACAAGGCAATGAAAACACCACCGGTAGGAAGATTCTCGAGAGCTCGCCGTCCTGGGTAAGTGATAGCCAACACCGTCACCTCCTCGCCGCAGCCGCAGCTGGTGGGGCCACCAATATTAAGCCCGATGCTGTTGTGGCCCAAGACGGAAGTGGGCAGTTCAAAACACTCACGGATGCTATTAGAAGTGTTCCAAAGAAAAATATGAAACCCTATGTAATTTACGTCAAGGCCGGCATATATAAGGAGATTGTGAACATTCCCAAGACTTCCAGCTATATCACCATCGTCGGAGATGGTCCCACCGCCACCAGATTCACCGGTAGTCTCAACTATGCCGACGGCGTCCAAACTTACAACACCGCAACATTCAGCGTGAATGCTCCATTCTTCACGGCCATGCACGTAGGGTTCGAGAACACAGCCGGAGCAATTAAGCACCAAGCCGTGGCGCTCCGAGTAACAGCAGATAAAGCCATCTTCTACAACTGCCACATGGACGGGTACCAAGACACCCTCTACGCGCAGTCCCACCGTCAGTTCTACCGCGACTGCGTCATCTCTGGCACCATCGACTTCATCTTCGGCGACGCGGACATGATCTTCCAGAACTGCACTTTGGTCGTCAGGCCACCTTTAAGCACCCAGAACTGCATCGTCTCCGCCAGTGGCCGAGACGTGAGCAACAGCCCCAGCGCCATGGTGTTCCAGAGCTGCCGCTTCACCGCCGACCCTCTCTACCTTTCCGACAAAGCGAAGAAGCCGGCATACCTTGGACGACCATGGAGGGCATACGCCAAAGTGATTATCATGGATTCTTATATCGACGGCTTCTTCGATCCCGAGGGTTACATGTCGTGGATGGGTAGCATCTATCACATGACCTCCATCTTCAACGAGTACAACAACAAAGGTCCCGGAGCCGATACCTCTCACAGAGTGAAATGGCCCGGCGTGAAGACGATCACTTCTGCTCAAGCTGGAAATTACTATCCTCACAATTTCTATGAATTCCGCAATGCAACTAACGCTGATGATGATTCCTGGATCCATGCCTCTGGGATTCCCTACGCCGTTGGCCCCATGGCCGTACCATCAAATTGA 1746 0.5292 MAVISLSGILLVAMVAVASAEDHGHLSVSQKNVDMLCSSTQYKETCQHSLRKASNGTTDVKEQIKATFHAAAKEFKKFIDNSTLFQELAKDNMTKQAMEICHEVLDYAIDDVRNSIDSVDQFDISKLGEYAYDVKVWLGGTISHQRTCLDGFENTTTHAAETMAKVLNTSLELSKNALDIISGLSDIAQAFGFVGFGFGGLQQDHADNNTGGQQAQGNENTTGRKILESSPSWVSDSQHRHLLAAAAAGGATNIKPDAVVAQDGSGQFKTLTDAIRSVPKKNMKPYVIYVKAGIYKEIVNIPKTSSYITIVGDGPTATRFTGSLNYADGVQTYNTATFSVNAPFFTAMHVGFENTAGAIKHQAVALRVTADKAIFYNCHMDGYQDTLYAQSHRQFYRDCVISGTIDFIFGDADMIFQNCTLVVRPPLSTQNCIVSASGRDVSNSPSAMVFQSCRFTADPLYLSDKAKKPAYLGRPWRAYAKVIIMDSYIDGFFDPEGYMSWMGSIYHMTSIFNEYNNKGPGADTSHRVKWPGVKTITSAQAGNYYPHNFYEFRNATNADDDSWIHASGIPYAVGPMAVPSN 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0697 581 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Lele24g0697 581 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 184 IPR006501 GO:0004857
Lele24g0697 581 CDD PMEI-like_3 36 185 - -
Lele24g0697 581 FunFam Pectinesterase 29 185 - -
Lele24g0697 581 Pfam Pectinesterase 257 549 IPR000070 GO:0030599|GO:0042545
Lele24g0697 581 Pfam Plant invertase/pectin methylesterase inhibitor 33 180 IPR006501 GO:0004857
Lele24g0697 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 185 IPR035513 -
Lele24g0697 581 Gene3D - 254 576 IPR012334 -
Lele24g0697 581 PANTHER PECTINESTERASE 7 565 - -
Lele24g0697 581 SMART PMEI_2 28 180 IPR006501 GO:0004857
Lele24g0697 581 FunFam Pectinesterase 4 254 575 - -
Lele24g0697 581 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Lele24g0697 581 SUPERFAMILY Pectin lyase-like 254 571 IPR011050 -
Lele24g0697 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 184 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0697 Lele-ChrLele24 4626706 4628535 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0697 3 577 Carbohydrate Esterase AT3G05610 41.638 4.61e-169 494