Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0696 ATGCAGATAACTCATGGCGATAACAACACCGGCAGCCTATATCAAGCTCATGGAGATAGCCACAACGGCGACCAGCAAGCACATGGCCATGAAAACACCTCCAATAGGAGGCTTCTCGAGAGCTTGCCGTCGTGGGTAAGTGATAGCCAACACCGTCGCCTCCTCGCCGCAGTTACAGCCGGTGCCGCCAATGTTAAGCCCGATGCTGTTGTGGCTCAAGACGGAAGTGGGCAGTTCAAAACACTCGCCGACGCTCTTAAACAAGTTCCGAAGAAAAATATGAAACCCTATGTGATTTACGTGAAGGCCGGCATATATAACGAGATTGTGAACATTCCCAAGACTTCCAGTTATATCACCATCGTCGGAGATGGTCCCACCGTCGTCAGATTCACCGGCAGTTTCAACTATGCCGACGGCGTCCTAACTTACAAAACCGCAACATTCGGCGTGAATGCTCCTTACTTCACGGCCATGCACGTAGCGTTCGAGAACACTGCCGGAGCAACCAAGCACCAGGCCGTGGCGCTCCGAGTAACAGCAGATAAAGCCATCTTCTACAACTGCCACATGGACGGGTACCAAGACACCCTCTACGCGCAGTCCCACCGTCAGTTCTACCGCGACGGCGTCATCTCCGGCACAATCGACTTCATCTTCGGCGACGCGGACATGATCTTCCAGAACTGCCCTTTGGTCGTCAGGACACCTTTAAGCAACTAG 723 0.5311 MQITHGDNNTGSLYQAHGDSHNGDQQAHGHENTSNRRLLESLPSWVSDSQHRRLLAAVTAGAANVKPDAVVAQDGSGQFKTLADALKQVPKKNMKPYVIYVKAGIYNEIVNIPKTSSYITIVGDGPTVVRFTGSFNYADGVLTYKTATFGVNAPYFTAMHVAFENTAGATKHQAVALRVTADKAIFYNCHMDGYQDTLYAQSHRQFYRDGVISGTIDFIFGDADMIFQNCPLVVRTPLSN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0696 240 MobiDBLite consensus disorder prediction 1 34 - -
Lele24g0696 240 Gene3D - 17 240 IPR012334 -
Lele24g0696 240 SUPERFAMILY Pectin lyase-like 65 237 IPR011050 -
Lele24g0696 240 Pfam Pectinesterase 68 239 IPR000070 GO:0030599|GO:0042545
Lele24g0696 240 MobiDBLite consensus disorder prediction 1 22 - -
Lele24g0696 240 ProSitePatterns Pectinesterase signature 1. 93 112 IPR018040 -
Lele24g0696 240 ProSitePatterns Pectinesterase signature 2. 212 221 IPR033131 -
Lele24g0696 240 PANTHER PECTINESTERASE 43 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0696 Lele-ChrLele24 4623412 4624233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0696 34 240 Carbohydrate Esterase AT3G05610 57.005 3.86e-79 249