Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0689 ATGAATTCGAATTATGGCAAATCCAACCAACAGAAAGGTTCTCCAGCCTCTCTGAACAACTTCAATTTTGACTTTGATCTTGGGATCGGATCGAATCGACCCAAATCTCTCAACGATCAGAAAAGCCATACCTCGTCCAATTCATATTTTACTTCTTCCTCCACATATTCGTTTGCTCAACCAAGACCCGCTTGGCAACCGGGCAAACCATCATGGACTCACCAGCCGTCGCCCAGCCTGGCGTTTCAGCCCGGCTTGCCGGGTGGTCCCGTTTCAATGGTTGGGGATATCTCCGGCAAGAGCTGGGGATCGACTCAACCTTCGACATCAAATTCGAGTATAGGAATTATGAACAAAGATCCTAATCTCTTCGGGGATTTGTTTGGCTCTGCTTTAGGGCAGAGTTCTAAGAGTAGCAATGTTCCCCTGAAAAATGCTACACCTATTTTGAAGGCATCCAGCACTGCATCGAACAAGAGTCCGTTTTCCACGGGGAATATGGCGGATTCTTTGCCTAAAACTAGTAGTACAGTTCAAAGCAATGGAAGTTGGGGATCTTCTGGGAATACGGGGAGCTATTCCAGCGGCTACAATAGGAATAGCACTATGAGCTCCAATAAAAGCACCATTCTTGGGGGTCCTTCATTGCGCAGTATGAATGCTGGAGGTGGTGCAACCGGTAGTGGAATGAGTTCTAAGAATGATCCATTTGGTTCTTTGGCTGGTTTTGGATCCAAACAGTCTGGTAGTCTTAACTCAGCTAGCAAAGCAAAAGAGAATGATACAGGGGATGATGGTTTTGGACATTTTCAGAGTGCTTACAAACCGAGCTCTACTGCATTCCCATCAAGTAATTCGACAGCAAATAGTATCAATCTTAATGGATCTGCGTCTTTGAGCCAGAAACCTGTGCAAACTTCTGGTAGTGATCCATTGGACATGTTCTTCTCAAGTTCCTCGGCCACATCTGGAAGTGCTGCTGTGGCCTCTGAAGGATTTGGAGGACAGCCTTCTTCAGAAGTTGATGATCGGGGCTTAGATTCTGAATTTGGTGGGGGAGTCCATGATGTGGGTGGAACAACCACTGAGCTTGAAGGACTTCCCCCTCCTCCTGCGGGTATATCTGGTTCTGCAGCAAAAAGTAAGGGGTTGGACAATTACAAGCAGGGACAATTTGCTGATGCTATAAAGTGGCTTTCCTGGGCTGTCATCCTTCTTGAGAAATCAGGTGATAATGCAGGCACTACGGAAGTTTTGTCATGCAGGGCTTCGTGTTTCAAAGAAGTTGGGGAGTACAAGAAAGCAGTAGTAGATTGTACGAAGGTGCTTGAGAGTGATGAAACAAACGTATCCGTTCTTGTACAACGTGCTCTTTTGTATGAGAGTATGGAAAAGTACAGACTTGGTGCTGAAGACCTGAGAACTGTTCTGAAGATTGATCCTATTAATAGGGTTGCAAGAAGTACCATTCACCGATTGAATAAGATGGCTGATTAG 1497 0.4569 MNSNYGKSNQQKGSPASLNNFNFDFDLGIGSNRPKSLNDQKSHTSSNSYFTSSSTYSFAQPRPAWQPGKPSWTHQPSPSLAFQPGLPGGPVSMVGDISGKSWGSTQPSTSNSSIGIMNKDPNLFGDLFGSALGQSSKSSNVPLKNATPILKASSTASNKSPFSTGNMADSLPKTSSTVQSNGSWGSSGNTGSYSSGYNRNSTMSSNKSTILGGPSLRSMNAGGGATGSGMSSKNDPFGSLAGFGSKQSGSLNSASKAKENDTGDDGFGHFQSAYKPSSTAFPSSNSTANSINLNGSASLSQKPVQTSGSDPLDMFFSSSSATSGSAAVASEGFGGQPSSEVDDRGLDSEFGGGVHDVGGTTTELEGLPPPPAGISGSAAKSKGLDNYKQGQFADAIKWLSWAVILLEKSGDNAGTTEVLSCRASCFKEVGEYKKAVVDCTKVLESDETNVSVLVQRALLYESMEKYRLGAEDLRTVLKIDPINRVARSTIHRLNKMAD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0689 498 PANTHER OS03G0340700 PROTEIN 1 498 - -
Lele24g0689 498 MobiDBLite consensus disorder prediction 272 329 - -
Lele24g0689 498 Gene3D Tetratricopeptide repeat domain 376 497 IPR011990 GO:0005515
Lele24g0689 498 MobiDBLite consensus disorder prediction 60 84 - -
Lele24g0689 498 SMART tpr_5 416 449 IPR019734 GO:0005515
Lele24g0689 498 SMART tpr_5 450 483 IPR019734 GO:0005515
Lele24g0689 498 SMART tpr_5 376 409 IPR019734 GO:0005515
Lele24g0689 498 MobiDBLite consensus disorder prediction 152 379 - -
Lele24g0689 498 MobiDBLite consensus disorder prediction 152 235 - -
Lele24g0689 498 SUPERFAMILY TPR-like 378 490 IPR011990 GO:0005515
Lele24g0689 498 MobiDBLite consensus disorder prediction 1 47 - -
Lele24g0689 498 MobiDBLite consensus disorder prediction 241 257 - -
Lele24g0689 498 MobiDBLite consensus disorder prediction 1 26 - -
Lele24g0689 498 MobiDBLite consensus disorder prediction 33 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0689 Lele-ChrLele24 4574563 4576519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0689 391 495 Calmodulin-binding Proteins AT3G25230 31.481 1.09e-08 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0689 24 4574563 4576519 Lele24g0689 24 4574563 4576519 ECH
Lele21g0708 21 4640269 4642228 Lele24g0689 24 4574563 4576519 hybridization
Lele22g0692 22 4537526 4538985 Lele24g0689 24 4574563 4576519 hybridization