LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele24g0688	ATGACCACTGTCTTCTCACTTTCTCTCCTTCACATTCAGTTTGGATTTCGGTATACAGTCTCTCTCTCTCTTTCTCGTGCGTTTTACTGTGACAGAAACGAGATTTTTGCTTCGTCTTTGTTTGTTTCTCTCTCTGTTGTGATCATGTGTGGAGGTGCTATCATTTCTGACTTCATTGCCGTCAAGCGAGGCCGGAAACTCACCGCCGGCGACCTTTGGTCCGAGCTGGACCCTTTCTCCGACCTTCATGGCTTCGATACTTCCGCCGGTTCCGCCAAAAACCAACCGCCTCAGAAACTCCCTCAGGTCCCAATCAACAAAGGGGCGGGTGTGAAGAAGGAGAAGAAAGGCGTGAGCGCAGAGAAAGCTGGCGGGAAGAGAGCACGGAAGAATGTGTACAGGGGAATAAGGCTGAGGCCATGGGGCAAGTGGGCCGCGGAGATAAGGGACCCACAAAAGGGAGTCCGAGTGTGGCTCGGCACCTACAACACCGCCGAAGAAGCCGCCAGGGCCTACGACGAAGCCGCCAAGCGCATCCGCGGCGACAAGGCCAAGCTCAATTTCCCTGACGCTCCTCCTCCAGAGCCGGAGCGACCCACCAAGAAGCGGTGCCTGAGCCCGGAGCTGAGCGAGGCGAGCAGTCACCAGACGGGACCGCCGTCGCCGTATGAGGCGGATCTGGAGCTCAAGCAGCAGATATCAGACCTGGAGTCACTGCTGGGGCTGGAGCCGGAGGAAGAGAAGAGCGGCGGAGGGAGCAGCGATGACGGCGACTGGACGGAGGCGCTGGACCTGTGGATGCTGGACGACGTCATGATGAATCACATGCCAAACAGTGAGCTGCTGTACTAA	852	0.5728	MTTVFSLSLLHIQFGFRYTVSLSLSRAFYCDRNEIFASSLFVSLSVVIMCGGAIISDFIAVKRGRKLTAGDLWSELDPFSDLHGFDTSAGSAKNQPPQKLPQVPINKGAGVKKEKKGVSAEKAGGKRARKNVYRGIRLRPWGKWAAEIRDPQKGVRVWLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPDAPPPEPERPTKKRCLSPELSEASSHQTGPPSPYEADLELKQQISDLESLLGLEPEEEKSGGGSSDDGDWTEALDLWMLDDVMMNHMPNSELLY	283

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele24g0688	283	Pfam	AP2 domain	132	181	IPR001471	GO:0003700\|GO:0006355
	Lele24g0688	283	PRINTS	Ethylene responsive element binding protein signature	133	144	IPR001471	GO:0003700\|GO:0006355
	Lele24g0688	283	PRINTS	Ethylene responsive element binding protein signature	155	171	IPR001471	GO:0003700\|GO:0006355
	Lele24g0688	283	SMART	rav1_2	132	195	IPR001471	GO:0003700\|GO:0006355
	Lele24g0688	283	FunFam	Ethylene-responsive transcription factor 2	131	190	-	-
	Lele24g0688	283	MobiDBLite	consensus disorder prediction	183	259	-	-
	Lele24g0688	283	SUPERFAMILY	DNA-binding domain	132	190	IPR016177	GO:0003677
	Lele24g0688	283	CDD	AP2	133	191	IPR001471	GO:0003700\|GO:0006355
	Lele24g0688	283	Gene3D	AP2/ERF domain	132	190	IPR036955	GO:0003700\|GO:0006355
	Lele24g0688	283	PANTHER	DNA-BINDING DOMAIN	107	221	IPR044808	GO:0003700\|GO:0009873
	Lele24g0688	283	ProSiteProfiles	AP2/ERF domain profile.	132	189	IPR001471	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele24g0688	Lele-ChrLele24	4565203	4566811	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele24g0688	49	275	AP2-EREBP Transcription Factor Family	AT3G16770	46.212	2.82e-57	182

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Lele24g0688		AP2	8e-15	CL0081