Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0685 ATGTCACCAGTCGCATCGCAAAGGCAAGGCGGCCCTGAGCCCGCTCGGATTTTCGATGAGTTGCCCAAAGCTACCATCGTCTCCGTCTCTCGTCCCGACGCTGGCGACATCAGTCCCATGCTTCTTTCTTACACCATTGAGTTTCAATACAAACAATTCAAGTGGCAGTTGGAGAAGAAAGCTTCTCAAGTGATTTATTTACATTTTGCGTTGAAGAAACGTGCATTTATTGAGGAAATTAATGAAAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAAAACTCTACTGTGGTGCAAGATGAAGAAGAAGTAGATGATGCAACTATCTTGCATCATGATGAAAGTGCTAAAGACAGGGACATTCCATCCATTGCTGCCTTGCCAATTATACGGCCAGCCTTAGGTGGGCAGCAGTCTGTCTCAGACAGAGCGATGGTTACTATGCAAGGATATCTCAATCACTTCTTTGGAAATATTAGTATTGTTAATTCTCCAGAGGTTTGCAAGTTTTTGGAGGCCTCAACGTTATCCTTCTCACCTGAATACGGCTCCAAGTTGAAAGAAGAATATGTGATGGTGAAGCATCTGCCAAACATTTCAAAGGATGATGATTCTAGACAATGTTGTATTGTTCAATGTTTCAGTTGTTGCAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAGCCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATACCCAACCTTTGGACATTATCGTTTTTGATGTACTTCGTGCCTCAGATGGGAATAGAGAAGGTTGTCCATCACTAGCAACAGAGATGGTTGAGCCAAACCCTTTACGCCATTCATTCAAGGTGACTTCTGGAAATCGAAGCATTAGGGTAAGAGTAAAGAGTAGTGAGAAAGTTAAAGATTGGGTGGCTGCTATTAATGATGCTGGAGTAAAACCTTCTGAAGGCTGGTGCCATCCTCACCGTTATGGTTCGTTTGCTCCTCCAAGAGGCTTGATTGAAGATGATAGCCAGGCTCAATGGTTCGTAGATGGTCAGGCAGCATTTGAAGCCATTTCTGCTTCAATTGAGGAAGCAAAATCGGAGAGCTTCATGCAGATATTTATTTGTGGGTGGTGGCTGTGCCCAGAACTGTATATGCGGCGTCCTTTTCACTCTCATGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAAGGCTAAGCAAGGGGTTCAGATTTTTATTCTTCTTTACAAAGAAGTGGCTCTTGCTTTGAAAATCAACAGCATTTACAGCAAGAAAAAGCTTCTCAGCATTCATGAGAATGTGAGGGTGCTACGCTATCCTGATCACTTTTCTAGTGGCGTTTACCTGTGGTCCCACCATGAAAAACTAGTTATTGTTGATCACCAGATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTTTGACACTCCTGAGCACAGAGTGGGAGATTTCCCTCCTTTGATCTGGCCTGGGAAGGACTATTATAACCCAAGGGAATCTGAACCAAACTCATGGGAAGATACAATGAAAGATGAATTAGATCGTGGAAAATATCCTCGTATGCCATGGCATGATGTCCACTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGAGATGGAATTATGCCAAGAGGAACAAAGCTCCATATGAGCAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATTCCACACTACTTGGGAAAAGACAAAGAATTGGAGATTGAAAATGAGAAACCTACCAATCATAGAAGAATGAGAAGGGATGATTCCTTTTACCTATCACCAGCCCAAAATATTCCTCTGCTTTTGCCTCAGGAATCTGATGGGCCACATACTCCTAAAGGATACCAAGAATCAAATGGGTTAAGCACCTTCTCAACTCTCAATCAGCCAATCAAGAAGAGTACAAGTCTTCCTCCCTTTTATCAGAAGCCCAAAATTCAACCAATTGGTTCAGATACACCGATGAAAAGCTTTGTAGATGAGATTGATTATATTAATGAAAGTGGGAAAATGTCTCAAGATAGAGTTGCTTGTGACATGGAGGCACAAGAACGGGGTGATCAGGGAGGCTTTGCTGATGAATCTGGGCACGTTGGTCCTCGTGCTTCTTGTCGCTGTCAAGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGGACAAGCCAAACTGAACAGAGCATCCACAATGCTTATTGCTCTCTAATTGAGAAAGCTGAATACTTCATCTACATAGAGAATCAATTTTTTATCTCAGGTCTCTCAGGAGATGAGAAGATTCAAAATCGTGTGTTAGAAGCTATATATCAACGGATTATGCGAGCTTACAATGATCAAAAAGTTTTTAGGGTTATAATTGTCATCCCACTCCTTCCTGGCTTCCAGGGAGGCCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATATGCAGAGGACAGAAATCTATATTGCATAATCTCTGTGATCTCCTGGGGGCAAAAGCCCATGACTACATATCTTTCTTTGGCCTCAGGTCTTATGGAAGACTCTTTGATGGTGGCCCGGTGGCAACCAGCCAGGTATATGTTCACAGTAAAATCATGATAGTCGATGACTGTACAACTTTGATAGGATCTGCTAATATTAACGATAGAAGTTTACTTGGCTCCAGAGACTCTGAGATTGGTGTTGTAATAGAAGACAGAGAGTTAACCGAATCATCTATGGGTGGAAAACCCTGGAAAGCAGGGAAGTTCTCACTGACTCTTCGATTGTCATTATGGTCTGAACACTTGGGTCTCCACGGAGGAGAGATTGATCAAATAGCAGACCCAATTGTTGATTCCACTTATAAGGACATTTGGATGGCAAGAGCAAAGAGAAACACTGCAATTTACCAAGATGTCTTTTCTTGCGTGCCGAATGATTTGATACACACCAGAGTTGCTTTCAGACAAAGCACAGCTCGCTGGAAAGAAAAAATTGGCCACACAACTATGGATATAGGAATTGCCCCGAAAGTGTTGGAATCTTTTCATAATGGAGCTATCAAGAATACGGATCCCTTGGAGAGATTAGCTTCAGCAAAGGGTCATCTTGTTTCTTTTTCATTGCAGTTCATGTGTCAAGAAAATTTGAAACCTGCCTTCAATGAAAGCGAGTACTACGCTTCCCAAGTTTTCCATTGA 3243 0.4243 MSPVASQRQGGPEPARIFDELPKATIVSVSRPDAGDISPMLLSYTIEFQYKQFKWQLEKKASQVIYLHFALKKRAFIEEINEKQEQVKEWLQNLGIGENSTVVQDEEEVDDATILHHDESAKDRDIPSIAALPIIRPALGGQQSVSDRAMVTMQGYLNHFFGNISIVNSPEVCKFLEASTLSFSPEYGSKLKEEYVMVKHLPNISKDDDSRQCCIVQCFSCCNDNWQKVWAVLKPGFLAFLADPFDTQPLDIIVFDVLRASDGNREGCPSLATEMVEPNPLRHSFKVTSGNRSIRVRVKSSEKVKDWVAAINDAGVKPSEGWCHPHRYGSFAPPRGLIEDDSQAQWFVDGQAAFEAISASIEEAKSESFMQIFICGWWLCPELYMRRPFHSHASSRLDNLLEAKAKQGVQIFILLYKEVALALKINSIYSKKKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHQICFIGGLDLCFGRFDTPEHRVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGKDKELEIENEKPTNHRRMRRDDSFYLSPAQNIPLLLPQESDGPHTPKGYQESNGLSTFSTLNQPIKKSTSLPPFYQKPKIQPIGSDTPMKSFVDEIDYINESGKMSQDRVACDMEAQERGDQGGFADESGHVGPRASCRCQVIRSVSQWSAGTSQTEQSIHNAYCSLIEKAEYFIYIENQFFISGLSGDEKIQNRVLEAIYQRIMRAYNDQKVFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQKSILHNLCDLLGAKAHDYISFFGLRSYGRLFDGGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVVIEDRELTESSMGGKPWKAGKFSLTLRLSLWSEHLGLHGGEIDQIADPIVDSTYKDIWMARAKRNTAIYQDVFSCVPNDLIHTRVAFRQSTARWKEKIGHTTMDIGIAPKVLESFHNGAIKNTDPLERLASAKGHLVSFSLQFMCQENLKPAFNESEYYASQVFH 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0685 1080 SUPERFAMILY Phospholipase D/nuclease 306 575 - -
Lele24g0685 1080 CDD PH_PLD 167 314 - -
Lele24g0685 1080 FunFam Phospholipase 711 931 - -
Lele24g0685 1080 CDD PLDc_vPLD1_2_yPLD_like_1 344 492 - -
Lele24g0685 1080 Gene3D Endonuclease Chain A 336 578 - -
Lele24g0685 1080 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 877 904 IPR001736 GO:0003824
Lele24g0685 1080 SMART pld_4 455 482 IPR001736 GO:0003824
Lele24g0685 1080 SMART pld_4 877 904 IPR001736 GO:0003824
Lele24g0685 1080 PIRSF PLD_euk 629 1080 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele24g0685 1080 PIRSF PLD_euk 23 605 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lele24g0685 1080 Gene3D - 209 315 IPR011993 -
Lele24g0685 1080 SUPERFAMILY Phospholipase D/nuclease 718 923 - -
Lele24g0685 1080 SMART PH_update 190 318 IPR001849 -
Lele24g0685 1080 ProSiteProfiles PH domain profile. 225 316 IPR001849 -
Lele24g0685 1080 CDD PLDc_vPLD1_2_yPLD_like_2 737 921 - -
Lele24g0685 1080 Pfam PLD-like domain 751 924 IPR025202 -
Lele24g0685 1080 Gene3D Endonuclease Chain A 699 933 - -
Lele24g0685 1080 PANTHER PHOSPHOLIPASE D 122 1070 IPR015679 -
Lele24g0685 1080 Coils Coil 73 93 - -
Lele24g0685 1080 Pfam Phospholipase D Active site motif 455 482 IPR001736 GO:0003824
Lele24g0685 1080 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 455 482 IPR001736 GO:0003824
Lele24g0685 1080 SUPERFAMILY PH domain-like 223 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0685 Lele-ChrLele24 4541922 4549446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0685 13 957 Phospholipase D Gene Family (Wang group) AT3G16785 70.921 0.0 1323