Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0684 ATGTGTTCCTCAGATTTTGAAGGCAATGCAAGCATCACTTTTCTCCTATATCAGTATTACTGGGATTCAAAGTGTGATTGGAATGTAGTCGTGGTCACCATGGTTCTCTTTCCATCTCTTTTTAATGGATTGGCGAGAACTGTGTCATTCAGAAGAGAAAAGAATAGTCCAAAGGATGGAGAAGATGGAAGGAAAGTTGTGGAAGCATTGGCCAAAGAAGCAAAGAAGAATGAACTGTTATTGAGTTCTTCTGGAACTCTAAAATCTCATAAAGCTGACACTTTTGCTTCTGTCTTCTCCAAGAGAGGCACAAAAGGAACCAATCAGGATCGTCTTGCTGTTTGGGAGGGATTTGGTTGCCAAGATGACATGATCTTCTGTGGGATATTTGATGGACATGGGCCTTGGGGACATTTTGTGGCCAAAAGGGTGAGAGAATTAATACCTGTTTCTTTACTCTGCAACTGGCAAGAAGGTTTGGCTGCAACATCACTTGATCTGAATTTTAAACTGGAGGAAGACAGAAACCTTCATTGGTTTGACCTATGGAAGCAATCTTACTTAAAGACTTGTGCTGCTGTGGATCAGGATCTGAAGAACCATGCCCGCTTTGATTCCTTTCAAAGTGGTGCTACTGCTTTGACGATTATTAAACAGGGTAAACTTCTCACTATAGCAAATTTAGGTGATTCTAGGGCTGTCTTGGCAACTTCTTCAGAGGATGTTGATGGAACACTGATTCCTCTTCAACTTACCACTGATTTTAAGCCAAACTTACCAGAGGAAGCAGAGCGCATAAAGCGGTGTAGGGGGAAGGTGTTTTGTATGGAAGATGAACCAGGAGTTTACAGAGTGTGGTTGCCAAATGGTAAAACTCCAGGGCTTGCCATTTCAAGAGCCTTTGGTGATTACTGCGTCAAGGACTTTGGACTCATCTCTGTGCCTCAAGTCACTCAAAGAACTCTCACCACCAGGGATCAGTTCATAATCTTGGCATCAGATGGGGTATGGGATGTTATTTCTAACGATGAAGCAGTGAAGATTGTATCCTCAGTGCCTCAGAAGGAAAAAGCAGCTCAGAGACTGGTTCGATGTGCTGCATACGAATGGAAACGACAGAGAAGAAACATAGCCATGGATGACATGTCAGCTATTTGTCTCTTCTTTCACTCTTGTTCTTCATCTTACTCACTTAAAACTTGTAAACCTGTCAAATAA 1218 0.422 MCSSDFEGNASITFLLYQYYWDSKCDWNVVVVTMVLFPSLFNGLARTVSFRREKNSPKDGEDGRKVVEALAKEAKKNELLLSSSGTLKSHKADTFASVFSKRGTKGTNQDRLAVWEGFGCQDDMIFCGIFDGHGPWGHFVAKRVRELIPVSLLCNWQEGLAATSLDLNFKLEEDRNLHWFDLWKQSYLKTCAAVDQDLKNHARFDSFQSGATALTIIKQGKLLTIANLGDSRAVLATSSEDVDGTLIPLQLTTDFKPNLPEEAERIKRCRGKVFCMEDEPGVYRVWLPNGKTPGLAISRAFGDYCVKDFGLISVPQVTQRTLTTRDQFIILASDGVWDVISNDEAVKIVSSVPQKEKAAQRLVRCAAYEWKRQRRNIAMDDMSAICLFFHSCSSSYSLKTCKPVK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0684 405 PANTHER PROTEIN PHOSPHATASE 84 387 - -
Lele24g0684 405 FunFam Probable protein phosphatase 2C 34 86 391 - -
Lele24g0684 405 Gene3D - 81 392 IPR036457 -
Lele24g0684 405 Pfam Protein phosphatase 2C 108 366 IPR001932 -
Lele24g0684 405 ProSiteProfiles PPM-type phosphatase domain profile. 95 389 IPR001932 -
Lele24g0684 405 CDD PP2Cc 95 389 IPR001932 -
Lele24g0684 405 SUPERFAMILY PP2C-like 89 390 IPR036457 -
Lele24g0684 405 SMART PP2C_4 86 387 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0684 Lele-ChrLele24 4536339 4539987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0684 34 390 PP2C-type Phosphatase Gene Family AT3G05640 59.384 2.43e-163 461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0701 21 4597451 4599699 Lele24g0684 24 4536339 4539987 hybridization
Lele22g0687 22 4494891 4502328 Lele24g0684 24 4536339 4539987 hybridization