Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0681 ATGTCCTTCAAGAATGATGTCGATGTTCTTTTCACAGCTTTGCAACTTCACCCAGATAAGAATAATCATCCCAAGGCTGAAATTGCGTTCAAGCTTGTCTCCGAGGCATATACATGTTTGTCTGATGCTGCAAAGAGAAAAGCCTTTGAGTTAGAGAGGTGGAAGAACTTCTGCTTTGAGTGTAAAAAGATCCCATACTCATCATCTGGCAGTGTCCCTCGCAATTCCAATGGTGGTTCAGGTTTCAAGGTATGGAATATTATCAGCAGGAAAGAATCTCCACTTTTCAATCCAGTAGATTATTTACAGAGAAGCAAGTCTCAACAACACAGGACAGAGAGAGAAACCCCTGTGTTCAACCCATCAGATTACTTTTACCACGGCTATCCTCATCTGAGAAGCCAAATTTTCAAGAATTCTGATAAGTTTTGAATGGAGCTTATATCTCTAAATCTATGGAAGAAACTGGCCAAGATATCTGCGGCGAAACTGGTTCTTTCCTTTTCAAATGTTTGCTCCCACAAGGTGGAATCTGAACTGGGGGCAACCAAAAACCAGTTTTCTGATGGTCCACCAGAACTGAGAATGTTAATAATCTCACCATCCAAACTCCAAAGTTGGGTGCAGTATGCCTCTAGAAGCCATGTTTCAACCTGCATGAACCATCAAAATCACAGAAGAGGCAACTCTCGGGTTCATATGAGAAGTAACTATGGAGTCAATAGAGCTGCTTATGTTAAGGAAGCACATCAACCCTTTACATTTATTGCTAAAGGTTCTCTTGAAATTCACACTGCCAAGTTCTCTTGGAAATATGGAAGTCTAGAAAGAAAACAAGCCAGTCAATATAGCATAAGAAGACGCAGAAAAGCATACACCCACCTCGGGGATCTTCTTTTCATCTTGAGCCGATCTTCTGTCACCGTTCGAACTAAAATGTGA 942 0.4119 MSFKNDVDVLFTALQLHPDKNNHPKAEIAFKLVSEAYTCLSDAAKRKAFELERWKNFCFECKKIPYSSSGSVPRNSNGGSGFKVWNIISRKESPLFNPVDYLQRSKSQQHRTERETPVFNPSDYFYHGYPHLRSQIFKNSDKFXMELISLNLWKKLAKISAAKLVLSFSNVCSHKVESELGATKNQFSDGPPELRMLIISPSKLQSWVQYASRSHVSTCMNHQNHRRGNSRVHMRSNYGVNRAAYVKEAHQPFTFIAKGSLEIHTAKFSWKYGSLERKQASQYSIRRRRKAYTHLGDLLFILSRSSVTVRTKM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0681 313 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lele24g0681 313 PRINTS DnaJ domain signature 25 45 IPR001623 -
Lele24g0681 313 PRINTS DnaJ domain signature 9 24 IPR001623 -
Lele24g0681 313 CDD DnaJ 13 42 IPR001623 -
Lele24g0681 313 ProSiteProfiles dnaJ domain profile. 1 53 IPR001623 -
Lele24g0681 313 Gene3D DnaJ domain 11 95 IPR036869 -
Lele24g0681 313 Pfam DnaJ domain 13 49 IPR001623 -
Lele24g0681 313 SUPERFAMILY Chaperone J-domain 13 52 IPR036869 -
Lele24g0681 313 PANTHER BNAC03G44070D PROTEIN 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0681 Lele-ChrLele24 4515627 4517891 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0681 24 4515627 4517891 Lele24g0681 24 4515627 4517891 ECH
Lele21g0698 21 4579276 4580483 Lele24g0681 24 4515627 4517891 hybridization
Lele22g0684 22 4479413 4480647 Lele24g0681 24 4515627 4517891 hybridization