Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele24g0667 | ATGAATCTAAGTGACGCCAAGGGATCCATGTCAACGGCAAGCTCTAGTACCGTCGACCAGTTCCCGGCGGGCTTGCGGGTACTGGTGGTCGACGATGATCCCACTTGCCTTATGATCCTTGAGAAGATGCTTCGCACTTGCCTCTACGAAGTAACAAAATGCAATCGAGCTGAAGTTGCATTGTCTCTTCTGAGAGAGAACAAAAAGGGGTTCGACATAGTTATAAGCGATGTGCATATGCCAGACATGGATGGCTTCAAGCTTTTAGAACACATAGGGTTGGAAATGGACCTTCCAGTTATTATGATGTCAGCAGATGATGGGAAAAATGTTGTTATGAAAGGTGTAACACATGGTGCTTGTGATTATCTAATAAAACCTGTGCGTATCGAGGCTTTGAAGAACATATGGCAGCATGTGGTTCGGAAAAGAAAGAACGAGTGGAAGGATTTGGAGCAATCCTATAGCACAGAAGAAGGAGATCGGCAGCAAAAGGCATCGGATGAAGCTGATTACTCATCGTCTGCAAATGAAGGAAATTGGAGAAATGCTAAGAAGAAGAGAGATGAGGAGGAAGAAGCAGAGGAGAAGGATGATACTTCTACATTAAAGAAGCCGCGCGTTGTTTGGTCCGTTGAGCTCCACCAACAGTTTGTGGCTGCCGTGAATCAGCTGGGAATTGACAAGGCCGTTCCCAAAAGAATTCTGGAATTGATGAATGTTCCTGGGCTTACCAGAGAAAATGTTGCTAGCCATCTCCAGAAATACCGTCTGTATCTAAGAAGACTCAGTGGCGTTTCTCAGCACCAGAGTAACCTGAACAACTCTTTCATCAGTCCACAAGAAGCAACCTTTGGAACAATGTCAGCGTTTAATGGAATTGATCTTCAAGCTCTTGCAGCTGCCGGCCAGCTTCCGGCACAAAGTCTGGCAGCTCTTCAAGCAGCAGGACTTGGTAGATCAACTGCTAAAGTTGGAGTATCTGTGCCCCTTGTCGATGAAAGGAACCTTTTCAGTTTTGAGAACCCCAGATTAAGATATGGAGATGGGCAACAACAGTACTTGAGCAGTTCTAAATCAATAAACTTGCTTCATGGAATCCCTACCAACATGGAGCCAAGGCAGCTCGCCAATTTGCACCAATCAACACAATCCCTCGGCAGCATGAATGTGCGAGTCGATGCATCGGCTGCACAGAGCAACTCTTTATTGATGCCAATTGCTCAATCTCGACCAAGAGGTCCAATGCTCAATGAAAACACTGCTTCGCATGTACCGAGACTTCCACTATCCGTTGGGCAGCCTACTGTACTAAATGGAATTTCTAATGCTGCTGCTCTGGGAAGAAATGGGATTGCTGGTAATAGCAGAGGAGCTTCCTATAATCCAATTCCACAAACTTCTTCAATGCCAAGTTTTCCCACAAACCAAACTACAGAAATTTCTGCCAGTAGTTTCCCACTTGGAAGCACACCAGGCATATCTAGCATCCCACCGAAAGGCGCATTTCAAGAGGAAGATACTTCAGGAATTAAAGGATCTGGGGGATTTGTGCCTAGTTATGATATTTTCGACGAACTGCGCCAGCATAAGTCCCATGATTGGGGACAAAATGTGGGCCTCACATACGATACCTCTCAGCGTGCGAATCCTTTACCCGGTAACATCGATGTCTTTCCATCGGTTATAGTACATCAGAGCTTTTCTTCCTCCACCCAACAACAGACTGGACAGAACGGAGATTCAACGCTGATAGGAAAATCCATGTACTCCCAAGGAAAAGGTTTGGAACAAGGAAATCTCCCAAATATTGATCAAAACCTCCATAGTCTTGTTGAAAATCCTGCAAGGGTTAAGACTGAAATAATTTCTGATGCATACTCTCATTCGAACTTCTTCCCCGAGCATTATGAGCAGGATGATCTCATGAGTGCACTTCTCAAACAGCAAGAAGGCATTGAAGCAGCTGAGAATGAATTTGACTTCGATGGATATTCCTTGGACAACATTCCTGTCTAG | 2019 | 0.4507 | MNLSDAKGSMSTASSSTVDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEVALSLLRENKKGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSYSTEEGDRQQKASDEADYSSSANEGNWRNAKKKRDEEEEAEEKDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNLNNSFISPQEATFGTMSAFNGIDLQALAAAGQLPAQSLAALQAAGLGRSTAKVGVSVPLVDERNLFSFENPRLRYGDGQQQYLSSSKSINLLHGIPTNMEPRQLANLHQSTQSLGSMNVRVDASAAQSNSLLMPIAQSRPRGPMLNENTASHVPRLPLSVGQPTVLNGISNAAALGRNGIAGNSRGASYNPIPQTSSMPSFPTNQTTEISASSFPLGSTPGISSIPPKGAFQEEDTSGIKGSGGFVPSYDIFDELRQHKSHDWGQNVGLTYDTSQRANPLPGNIDVFPSVIVHQSFSSSTQQQTGQNGDSTLIGKSMYSQGKGLEQGNLPNIDQNLHSLVENPARVKTEIISDAYSHSNFFPEHYEQDDLMSALLKQQEGIEAAENEFDFDGYSLDNIPV | 672 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele24g0667 | 672 | SMART | REC_2 | 25 | 137 | IPR001789 | GO:0000160 | |
Lele24g0667 | 672 | MobiDBLite | consensus disorder prediction | 181 | 202 | - | - | |
Lele24g0667 | 672 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 25 | 370 | IPR045279 | GO:0009736 | |
Lele24g0667 | 672 | Gene3D | - | 25 | 163 | - | - | |
Lele24g0667 | 672 | MobiDBLite | consensus disorder prediction | 458 | 514 | - | - | |
Lele24g0667 | 672 | MobiDBLite | consensus disorder prediction | 153 | 202 | - | - | |
Lele24g0667 | 672 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 204 | 261 | IPR017930 | - | |
Lele24g0667 | 672 | CDD | REC_typeB_ARR-like | 27 | 141 | - | - | |
Lele24g0667 | 672 | SUPERFAMILY | CheY-like | 24 | 149 | IPR011006 | - | |
Lele24g0667 | 672 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 205 | 258 | IPR006447 | GO:0003677 | |
Lele24g0667 | 672 | FunFam | Two-component response regulator | 25 | 162 | - | - | |
Lele24g0667 | 672 | FunFam | Two-component response regulator | 201 | 264 | - | - | |
Lele24g0667 | 672 | ProSiteProfiles | Response regulatory domain profile. | 26 | 141 | IPR001789 | GO:0000160 | |
Lele24g0667 | 672 | PIRSF | RR_ARR_type-B | 4 | 663 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Lele24g0667 | 672 | MobiDBLite | consensus disorder prediction | 458 | 492 | - | - | |
Lele24g0667 | 672 | MobiDBLite | consensus disorder prediction | 153 | 168 | - | - | |
Lele24g0667 | 672 | Pfam | Myb-like DNA-binding domain | 207 | 257 | IPR001005 | - | |
Lele24g0667 | 672 | SUPERFAMILY | Homeodomain-like | 202 | 262 | IPR009057 | - | |
Lele24g0667 | 672 | Pfam | Response regulator receiver domain | 27 | 135 | IPR001789 | GO:0000160 | |
Lele24g0667 | 672 | Gene3D | - | 202 | 264 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele24g0667 | Lele-ChrLele24 | 4438683 | 4441625 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele24g0667 | 59 | 672 | Response Regulator Gene Family | AT3G16857 | 50.383 | 0.0 | 534 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-ARR-B | Lele24g0667 | Response_reg | 9.8e-23 | CL0304 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele24g0667 | 24 | 4438683 | 4441625 | Lele24g0667 | 24 | 4438683 | 4441625 | ECH | |
Lele21g0682 | 21 | 4491033 | 4494005 | Lele24g0667 | 24 | 4438683 | 4441625 | hybridization | |
Lele22g0670 | 22 | 4404944 | 4407942 | Lele24g0667 | 24 | 4438683 | 4441625 | hybridization |