Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0666 ATGGTTTTGGATTCCCGTTGCTGCTGCTTCTCCTTCCAAGTCGTCGTCTTCCTCATCTTCTTCGCACTGCCTTCGATTTCTCGTGCCCAGACTGCCACCTCCTGCAACGGCATACTCGTCTCGTACGCCTATACCCGCGGAACTCGGCTGCCGCCCAATGTCTCCGATCCCAAGCAGCAACCGTACCGATTCGAGTCCACGATCACTGTGCTCAACAATGGACTCGACGAACTCAAGTCCTGGAAGGTTTTTGTGGGGTTCCAGCACAACGAGTTCTTAGTCTCTGCGTCTAATGCGGTGCTCGGCGATGGCACTAGCCTCCCTGCTGGCGTCGGAAACGGAACCGTCTTTGCTGGGTACCCCATGACTGATCTCAAGACAGCGGTCGAGACTGCTGGGGACTCGACGCAGATGCAGGTTCAGATCGATTTGGTGGGCACAGTGTTCGGCGTGGCGCCTCCCAACTTGCCGTTGCCCGCAAACATCACCCTCGCCAATGATGGATTCGTCTGTCGTAAGCCCACTGGTCAAGGTAAGAATGAGACTCGAGTTTGTTGTACAAAAGATCCCAAATTCAAGACAAACATAACCACGGATGAAGAATTCCTACCGCGCCAGAATGGTGATCTTACAATCATGTATGATGTGATCAGAACTTATGATTCCAATTATTGGGCAGAGGTTACAATCTCAAATCATAACCCTCTTGGTCGTCTTGACAACTGGAAATTAAACTGGGATTGGATGAAGGGTGAGTTCATTTATTCAATGAAGGGGGCTTATCCAACTAATGTGGATTCTTCTGAATGTATATTTGGCCCACAAGGCACATACTATAAGGATCTTGACTTTGCCAATGTTCTGAATTGTGAAAGAAGGCCGACGATAATCGATCTCCCTCCCACAAAGTTTAATGACACAGAACTGGGGAAAATTCCTTTTTGCTGCCGGAATGGTACAATCTTGCCACCATTGATGGACCCAAGCATGTCATCTTCAAGATTCCAAATGCAGGTCTTTAAATTGCCACCAGACCTTAATCGCTCCCAGCTTTCGCCACCGCAGAGCTGGAAGATAAGCGGTACTCTAAATCCTGACTACAAATGTGGCGCGCCTATGAGGGTAAGTCCTAGTGAAACCCCAGATCCTTCAGGCATACCATCAAACAAATCTGCAATGGCAAGCTGGCAGATTGTGTGTAATATAACACAGGCCAAAGGGGCACCGCGTAAATGCTGTGTCTCATTTTCAGCATATTATAACGAATCTGTCATTCCTTGCAAAACTTGTGCATGTGGGTGTCCAAGTAACACAGGAAGAACTTGCAGTACTACTGCACCAGCTATGCTTCTTCCACCAGAGGCAATCCTTGTTCCTTTCGTGAATCGGACTGCTAAGGCTCTTGCTTGGGCTAGTCTGAAACATCTGTCAGTGCCAAAGTCAATGCCGTGTGGTGATAACTGTGGCGTGTCGATAAACTGGCATCTTCTTACAGACTATAGCCGAGGATGGAGTGCAAGGGTCACACTTTTCAATTGGGGAGACACTAATTTTGCTGACTGGTTTGCTGCTGTGCAAATGGATAAAGCAGCTGCTGGTTTTGAGAAAATGTATTCATTCAATGGAAGTACCTTAGATGGTGTTAATAATACCATATTTATGCAAGGTCTTCCAGGATTGAACTACCTTGTGGCAGAAACTGATGGGGCAAACCCCGCGAGCGATCCGAGGGTTCCCGGTAAACAACAGTCGGTGATATCTTTTACGAAGAAGACTACTGCCGGAATCAATGTGCTGGGTGGAGATGGGTTCCCTACTAAAGTCTTCTTCAATGGGGAGGAGTGCTCACTTCCCTCTGTGCTTCCGACCAATGGATTTAAGAAGGAATCTTCGCTGGCTACTTCAATGATCTTGACACTGTTTCTGTTGAGTGATTGCGATACAGATGAATGTAGAGATGTCTTGGATGATAGAAATGTATTCTTTTTGTTCTTTTGTTTTGTATGA 2007 0.4714 MVLDSRCCCFSFQVVVFLIFFALPSISRAQTATSCNGILVSYAYTRGTRLPPNVSDPKQQPYRFESTITVLNNGLDELKSWKVFVGFQHNEFLVSASNAVLGDGTSLPAGVGNGTVFAGYPMTDLKTAVETAGDSTQMQVQIDLVGTVFGVAPPNLPLPANITLANDGFVCRKPTGQGKNETRVCCTKDPKFKTNITTDEEFLPRQNGDLTIMYDVIRTYDSNYWAEVTISNHNPLGRLDNWKLNWDWMKGEFIYSMKGAYPTNVDSSECIFGPQGTYYKDLDFANVLNCERRPTIIDLPPTKFNDTELGKIPFCCRNGTILPPLMDPSMSSSRFQMQVFKLPPDLNRSQLSPPQSWKISGTLNPDYKCGAPMRVSPSETPDPSGIPSNKSAMASWQIVCNITQAKGAPRKCCVSFSAYYNESVIPCKTCACGCPSNTGRTCSTTAPAMLLPPEAILVPFVNRTAKALAWASLKHLSVPKSMPCGDNCGVSINWHLLTDYSRGWSARVTLFNWGDTNFADWFAAVQMDKAAAGFEKMYSFNGSTLDGVNNTIFMQGLPGLNYLVAETDGANPASDPRVPGKQQSVISFTKKTTAGINVLGGDGFPTKVFFNGEECSLPSVLPTNGFKKESSLATSMILTLFLLSDCDTDECRDVLDDRNVFFLFFCFV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0666 668 PANTHER COBRA-LIKE PROTEIN 7 29 642 - -
Lele24g0666 668 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0666 Lele-ChrLele24 4435025 4437666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0666 35 633 COBRA Gene Family AT4G16120 68.605 0.0 884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0666 24 4435025 4437666 Lele24g0666 24 4435025 4437666 ECH
Lele21g0681 21 4485889 4488234 Lele24g0666 24 4435025 4437666 hybridization
Lele22g0669 22 4401167 4404338 Lele24g0666 24 4435025 4437666 hybridization