Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0620 ATGTTGTACCCTAAAATTGTGAAGCAGATTGAGTATTATTTTAGTAAAAAAAATCTGGACACAGATGAATACTTGAGGAAGAACATGGACAAGAATGGCTGGGTTCATGTCTCCGTGATTGCAGACTTCAACAGAATGAAAAAATTGACTCGGAATATCTATCATATATTGGAAGCTCTTGTTTATTCTTCTGTTGTGCAAGTTGAAGAATTTCAATTCTTGCCGATAGAGTCTTGTGACCTAGCGGCGTGCTTCTCAGTATCTGTTCCGAGGCCTCGCGGTGACGACGATGATGCCGACGATTCCCCGTTGCCAGTGGGGAGGAGCGGACCTTATTCGTGGCACCTCGGAGATTCCCGTGCTGTCAAGGGCTTAAAACTCACGGGCAGCAATGGAGATTATCTCCCACTTCAGCTATCAAAGGAACACAATGCAAGTAGTGAGGATGTTAGACGGCAGCTTCATGATTTGCACCCAAATGATCCCCAAATTGCTCAAATGAAGCGTGGAGCTTTGAGGGTAAAAGGTATCTTTCAGGAGCCGAGTGCTGCAAAATTTAGACTGGAAGCACCAAGGGACATGCCTTACTTGAGTGCTGATCCAGAAATTATGACTCATGCTCTCACAGCAAATGATTCATTCCTTTATATTTGA 654 0.4404 MLYPKIVKQIEYYFSKKNLDTDEYLRKNMDKNGWVHVSVIADFNRMKKLTRNIYHILEALVYSSVVQVEEFQFLPIESCDLAACFSVSVPRPRGDDDDADDSPLPVGRSGPYSWHLGDSRAVKGLKLTGSNGDYLPLQLSKEHNASSEDVRRQLHDLHPNDPQIAQMKRGALRVKGIFQEPSAAKFRLEAPRDMPYLSADPEIMTHALTANDSFLYI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0620 217 PANTHER LUPUS LA PROTEIN-RELATED 5 70 IPR045180 -
Lele24g0620 217 Gene3D - 111 217 IPR036457 -
Lele24g0620 217 ProSiteProfiles La-type HTH domain profile. 1 85 IPR006630 -
Lele24g0620 217 Gene3D - 1 73 IPR036388 -
Lele24g0620 217 SUPERFAMILY "Winged helix" DNA-binding domain 2 70 IPR036390 -
Lele24g0620 217 CDD LAM 3 70 - -
Lele24g0620 217 Pfam La domain 6 60 IPR006630 -
Lele24g0620 217 SUPERFAMILY PP2C-like 111 215 IPR036457 -
Lele24g0620 217 SMART la 1 92 IPR006630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0620 Lele-ChrLele24 4141823 4144296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0620 116 215 PP2C-type Phosphatase Gene Family AT3G17090 46.154 7.61e-25 97.8