Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0613 ATGGCCTCGTCTCTGATCTCGAACCCGGTGACGAACACGGACCGGTCACGTGACCCCTCCAAAAGGAGGAGGAAGAAGAAAGCTCAGCTCAAGCAACAGCTAGACGAACAGAACCATGTCAAATGGAAGTCCCCTTCTCAGCAGCAAATCTACTCCTCCAAGCTCCACCAAGCCTTGGCCAGAGTCAACCTCCGCTCCTCCGGTTCTGCCACCGCCGGTGACGCGCCCTGCCGCTGTAAAGCCGTCCGCGAAGCCGCCGATAGAGTCCTTGCCGTCACTGCCAAGGGCAGGACCCGGTGGAGTCGAGCCATCCTCACCAATCGGCTCAAGCTCAAGTTCAGGAAGAACAAGATACAGAGAGTCACGGCGGCGGCCCTTGGCACGGCCCGGTCGAAGAAGCCAAGAGTAAGCGTTCTCCGGTTGAAGGGGAAGAGTTTGCCGACGGTTCAGAGGACTGTGAGGTTCCTGGGGCAGTTGGTCCCCGGTTGCCGGAAACAACCGGTGCCGGTAATATTGGAGGAAGCCATTGATTACATATCAGCGCTGGAAATGCAAGTCAGAGCCATGAGCGCGCTCGCTGACCTTCTTTCTGGGTCAAATGCTTCCGGCATCGGCTCGAGTTCCTCGGCGCCACCCAGCTGA 642 0.5857 MASSLISNPVTNTDRSRDPSKRRRKKKAQLKQQLDEQNHVKWKSPSQQQIYSSKLHQALARVNLRSSGSATAGDAPCRCKAVREAADRVLAVTAKGRTRWSRAILTNRLKLKFRKNKIQRVTAAALGTARSKKPRVSVLRLKGKSLPTVQRTVRFLGQLVPGCRKQPVPVILEEAIDYISALEMQVRAMSALADLLSGSNASGIGSSSSAPPS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0613 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 200 IPR036638 GO:0046983
Lele24g0613 213 CDD bHLH_AtIBH1_like 138 193 IPR044549 GO:0006355
Lele24g0613 213 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 45 196 IPR044660 GO:0006355
Lele24g0613 213 MobiDBLite consensus disorder prediction 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0613 Lele-ChrLele24 4105408 4106049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0613 39 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 57.377 1.26e-51 164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0616 21 4134882 4137056 Lele24g0613 24 4105408 4106049 hybridization
Lele22g0614 22 4071249 4073180 Lele24g0613 24 4105408 4106049 hybridization