Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0612 ATGACAAACTTCGTTGCATTTTCCGACGAGATTCCGACCATGAGTAGTTCAAGTCTGATGAGCTTCCCTCAACCTCCTTCTTTCTCATCATCAACCATCTACGACATGACGACGACGACGATGCCGCTAACGGAGAACGATTACAAGCTTAATTACTCCTCCGCTTTCATGGACTTGCTCAATCTCCAAGATTACAGTCCTTCTTTGTTCGATTGCCTCCCTTCCTCCGCCACTTACCACAACCACTACCCTCTTCCGTCGCCGGGGAGCTCCAACGTTCCCGAATCCTCCGAGGTCTTGAACACCACTCCGGCCTCCCCTAATTCTTCCTCCATCTCCTCTTCCTCCAATGAAACCCCCCTCGCCGATCATACCATCATCGACCAGGCTCACACTAGTGGTAAACAAGAACCTGACGATGAACAACACAGAGATGCAGCCAAAGGAGACGACATGGATCAACACAAGATTAAGAAACAGTTGAAGCCGAAGAAGAAGAACCAGAAGAAGCAAAGAGAGCCCAGATTTGCGTTCATGACAAAGAGCGAAGTTGATCAACTCGACGACGGCTACAGGTGGCGCAAGTATGGCCAAAAAGCCGTCAAAAACAGCCCCTATCCCAGGAGCTATTATCGTTGCACCACCCCCGGTTGCGGTGTGAAGAAGCGGGTGGAGCGGTCGTCGGAGGACCCGTCGATCGTGGTGACGACGTACGAGGGGCAACACACACACCCGAGTCCGGTGACGAGCCGGGCAAGGCTGGTCGGATTTGGACCCTCCACGAGGGCCAGTAGTTGTGGCGTGCTTGGTTCGCCACAACAACAGTTTGTGGTGCCACAAGCACGGCATCAGCATCATGTTCAGGAACAAGAGCATGTGCAGCCACAAGACGATGCTTTGTTGTATAATAATAATAGCTCACCCCCACTTCTTCCTATGAGTATTACTACTGATCCAACGACGTCGCCTTCCTCGTCATTCTCCAGCTTTCACCGTCATCATCTTCTAGGTTTTGGACCATCGTCCACGACTGCGGCTTCTCTGTTAAGGGACAATGGGCTGCTTCAGGACATTATTCAGATGAGGAAGGAGGAGGAGAAAGAGGAAATAGAAGAATAG 1119 0.513 MTNFVAFSDEIPTMSSSSLMSFPQPPSFSSSTIYDMTTTTMPLTENDYKLNYSSAFMDLLNLQDYSPSLFDCLPSSATYHNHYPLPSPGSSNVPESSEVLNTTPASPNSSSISSSSNETPLADHTIIDQAHTSGKQEPDDEQHRDAAKGDDMDQHKIKKQLKPKKKNQKKQREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTPGCGVKKRVERSSEDPSIVVTTYEGQHTHPSPVTSRARLVGFGPSTRASSCGVLGSPQQQFVVPQARHQHHVQEQEHVQPQDDALLYNNNSSPPLLPMSITTDPTTSPSSSFSSFHRHHLLGFGPSSTTAASLLRDNGLLQDIIQMRKEEEKEEIEE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0612 372 FunFam WRKY transcription factor 57 173 247 - -
Lele24g0612 372 SMART WRKY_cls 187 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele24g0612 372 Coils Coil 361 372 - -
Lele24g0612 372 MobiDBLite consensus disorder prediction 133 158 - -
Lele24g0612 372 Gene3D WRKY domain 170 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele24g0612 372 ProSiteProfiles WRKY domain profile. 182 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele24g0612 372 MobiDBLite consensus disorder prediction 88 123 - -
Lele24g0612 372 Pfam WRKY DNA -binding domain 188 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele24g0612 372 MobiDBLite consensus disorder prediction 88 176 - -
Lele24g0612 372 SUPERFAMILY WRKY DNA-binding domain 179 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele24g0612 372 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 79 287 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0612 Lele-ChrLele24 4082685 4084196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0612 158 365 WRKY Transcription Factor Family AT2G47260 50.000 3.21e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele24g0612 WRKY 2.6e-27 CL0274