Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0594 ATGGCTGCAAATAAGAGTGTGAATCTCTCTCCCTCTGATGCCTCTAGCATCTCAGGAGGGTCCAAAGGAGAAACCAGAGATGAAGTGATCAAAAACCAGAAGATGAAGATGGTTCAAGTTAGCAGCAGCGACGATGATTCTCGTTGTAAATCGAAGATCGAGCTGGATTTCTTCAAATCCGAAGTGAATATCATAGGTTCTTCATCATCTAAAACAGATATCAAAGATCGTGAAAATGATTATCTTGATGATCATGAGAAGAACAACACTAGTGCAGAACGGACTTTTTGTTGCAACTTCTGCAAAAGAGAGTTCTCTTCCTCCCAAGCCCTAGGAGGCCATCAAAACGCACACAAACAAGAGCGTGCAATTGCAAAACGACGACAAGCTGGGATTGTTTCTGATCATCATCTTGGTTTCTTAGGGAGTCACTATTATTCTCCACACTATCCTTATTATGGTAATTACCCTACTTATCATCCTAACCCTCTGGTTAACAGCCCTTTGATAAATTATAGCAGGCCACTTGGGGTTAGAATGGACTCCATGATTCATAAACCTTCTCATAATAACCCTAATTTTAGGTTTAGGCATGATCATCAAACCCCAGATAGGTTTGGAATTAGGGCAAGCTCTGGAACTCTGAGGATCGAAGAAATTGGTGATATTAGCCCTCCAAATCGTCATCAGATTGGGCACAATTCATCTTCTTCAACTACTGTTGCTACTGTACATGTTACTGCTACTACTGGTGATCAACATATCAAATTTATACCGGAAAAAGCTCCTAAAGAGAATAATGACGATTTTGATTCTTCGGGTCTTGATTTGTCTCTTAAGCTTTAA 846 0.4019 MAANKSVNLSPSDASSISGGSKGETRDEVIKNQKMKMVQVSSSDDDSRCKSKIELDFFKSEVNIIGSSSSKTDIKDRENDYLDDHEKNNTSAERTFCCNFCKREFSSSQALGGHQNAHKQERAIAKRRQAGIVSDHHLGFLGSHYYSPHYPYYGNYPTYHPNPLVNSPLINYSRPLGVRMDSMIHKPSHNNPNFRFRHDHQTPDRFGIRASSGTLRIEEIGDISPPNRHQIGHNSSSSTTVATVHVTATTGDQHIKFIPEKAPKENNDDFDSSGLDLSLKL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0594 281 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 281 IPR044246 GO:0009788
Lele24g0594 281 Gene3D Classic Zinc Finger 68 138 - -
Lele24g0594 281 MobiDBLite consensus disorder prediction 1 28 - -
Lele24g0594 281 ProSitePatterns Zinc finger C2H2 type domain signature. 97 118 IPR013087 -
Lele24g0594 281 SUPERFAMILY beta-beta-alpha zinc fingers 93 123 IPR036236 -
Lele24g0594 281 MobiDBLite consensus disorder prediction 1 22 - -
Lele24g0594 281 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
Lele24g0594 281 MobiDBLite consensus disorder prediction 259 281 - -
Lele24g0594 281 Pfam C2H2-type zinc finger 96 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0594 Lele-ChrLele24 3993136 3994557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0594 89 281 C2H2 Transcription Factor Family AT5G01860 34.197 2.58e-17 77.0