Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0579 ATGATCGTGACCAAAGAAATTGTCTGTCAGCAAGGCATTCCTGTTTTGGATGTGGAGTATCATCTTCGCGTAGCACAAGAACACAACGTCAAGGTGGAGGTTTCGCCGAGATCTTCTTCTGTTCCGATCTTTGGCCAAGTTCGGGTTTCTTCTGAATCAATTTCTACCGAAACGTGCGGCTTTGAAACGGCTGAGAGTTGTCCTGAGATAATTAAGGATTCCATTATAGAGATCTCCTCATCTAAGTTCATCCCGAATGTCCGATCTGGTAGCCATGCTGATATTGGACCACGGGGATCTATGGATGATGAACACATTCAAATAGATGATCTCGCTTCCCATCTTGGGCTTGTGTTCAAGTCTCCAATACCAAGTGCATTTTATGCAGTTTTTGACGGCCATGGAGGGCCCGATGCAGCCTATTTTGTCAAGAGGAATGCTATGAGACTATTTTTTGAAGATGCTAATATGCTGCTGTCATATGATACTGATGCATTATTTCTGAAGAAATTGGAGGATTCCCATAGGAAAGCTTTCTTACTTGCAGACCTCGCCTTGGCTAATGAAGCCTCTGTTAGTAGTTCCTGTGGGACAACAGCATTGACTGCACTTATACTTGGAAATCATTTACTGGTTGCTAATTCTGGCGATTGTCGGGCCGTTCTTTGCAGAAGAGGAGTGGCTGTTGACTTGTCTAAAGATCATAGGCCGAGTTATTTACCAGAAAAGAGAAGGGTGGAAGAGTTAGGTGGCTTCATTGATGATGGCTATCTCAATGGTTATCTGTCTGTGACCCGAGCCCTCGGGGATTGGGATTTAAAATTTCCACTTGGTTCTGCTTCACCCCTTATTGCTGATCCAGATGTTCTACAGGTTTCATTGACTGAGGATGATGAGTTTTTGATCATTGGGTGTGATGGGATTTGGGATGTGATGTCAAGTCAGGAAGCAGTTAGTTTGGTCCGCCGTGGGTTAAGAAGGCACGATGATCCACAGCAATGTGCTATAGAGCTAGTCAAGGAAGCACTGCGCTTGAATACATCAGATAATCTCACTGTGATTGTTATAAGCCTGTCCTCCATTGAAAGCATAGTTGAATCATGTCCCCCCCAAAGGCGAAGATTCAGAGCTTGCTCTCTTTCCGAAGAGGCGCGTAACAGATTGAAGAGCTTACTGGAGGGCAATTGA 1188 0.4461 MIVTKEIVCQQGIPVLDVEYHLRVAQEHNVKVEVSPRSSSVPIFGQVRVSSESISTETCGFETAESCPEIIKDSIIEISSSKFIPNVRSGSHADIGPRGSMDDEHIQIDDLASHLGLVFKSPIPSAFYAVFDGHGGPDAAYFVKRNAMRLFFEDANMLLSYDTDALFLKKLEDSHRKAFLLADLALANEASVSSSCGTTALTALILGNHLLVANSGDCRAVLCRRGVAVDLSKDHRPSYLPEKRRVEELGGFIDDGYLNGYLSVTRALGDWDLKFPLGSASPLIADPDVLQVSLTEDDEFLIIGCDGIWDVMSSQEAVSLVRRGLRRHDDPQQCAIELVKEALRLNTSDNLTVIVISLSSIESIVESCPPQRRRFRACSLSEEARNRLKSLLEGN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0579 395 SUPERFAMILY PP2C-like 79 359 IPR036457 -
Lele24g0579 395 ProSitePatterns PPM-type phosphatase domain signature. 127 135 IPR000222 GO:0043169
Lele24g0579 395 CDD PP2Cc 87 358 IPR001932 -
Lele24g0579 395 Gene3D - 75 363 IPR036457 -
Lele24g0579 395 SMART PP2C_SIG_2 103 358 IPR001932 -
Lele24g0579 395 ProSiteProfiles PPM-type phosphatase domain profile. 88 358 IPR001932 -
Lele24g0579 395 Pfam Protein phosphatase 2C 96 350 IPR001932 -
Lele24g0579 395 PANTHER PROTEIN PHOSPHATASE 2C 77 357 IPR015655 GO:0004722|GO:0006470
Lele24g0579 395 SMART PP2C_4 78 356 IPR001932 -
Lele24g0579 395 FunFam Probable protein phosphatase 2C 22 73 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0579 Lele-ChrLele24 3883646 3885464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0579 1 394 PP2C-type Phosphatase Gene Family AT1G48040 57.463 8.12e-151 430