Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0564 ATGGAGGCTAAATTTCGGGGGAAGAGTCAGTATGTCTATGGACCTGTGGTGCCGGAAATGAAAGTGGTTGGAAAGAAGAGTTTGGAGTGGAATTTGGAAGACTGGAAATGGGACGGAGATCTTTTCACGGCTAGTCCACTAAATTCAGTTCCATCTGATTGTAGAAACAAGCAGTCTTTCCCAGTTGATCCTGAAATTCCTGCGAAAGCTAATACTTCTAGCATTTTATCTTCTAATTGGGATGATGTCAACCCAGAGAAAGGAAAGAGAGAGTTGGATAAAAGGAGGAGAGCTGTTATATCTGAAGGTGATGAGCTGAATGATGAAGCTGGTTGTCTTAATTTAAACCTTGGGGCTCAAATTTACCCTATCATGGAAGGGGATGCAAAAAGTGGAAAGAAGACAAAGATAGTTGGGGGTGGGACTACTTCAAACCTAGCGGTTTGTCAGGTGGAAGATTGTAGGGCCGATCTTAGTAATGCAAAAGATTACCACCGTCGGCATAAGGTTTGTGAGATGCATTCCAAGGCCAGCAAAGCACTGGTAGGAAATGTTATGCAGCGTTTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAGGGGAAAAGAAGTTGTCGGAGGCGTTTGGCAGGCCACAATAGGAGGAGGAGGAAGACACATCCTGATGCTGTCGTTAATGGAGGCTCCCTGAATGATGAAAGGGGCAGCAGCTATCTGTTAACAAGTCTTCTCCGTATACTGTCCAATATGCACTCAAATGGCTCAGATGCTACTAGGGACCTAGATATTCTCTCTCATCTGCTAAGGAATCTGGCAAGTCTAGCTGGTACAATCAATGGAAGGAACATAGCCTCCTTATTGGAGGGATCCCAAAGTTTTGTGAATGCTGGAACATCTGGAACTTCCCAAAAAGTGCCTAATCTAAATTCAAATGGGCCCGAACCCATCAAATCTCCTGGCTCTTCCATCAAGACAGATAATGGTCTCAGCAGTTGGGACCCTCCAAAGCCTATGGGACAGTCTGAGATAGTGCCTGCATATGATATGGCACAAAAATGTTCACCTTCAGGTCATGTTGGGGTTGGGAGTTTAAAATCTCCTTCAGGATCACAGCCTTCAAATGTGCTTCTGTCAAGGGATAGCCTTCAACCCCAATCAGTTGCAGCAGAGACTACAGTTAGAAGGAACGGTTTAAATCACATTGACCTCAATAACGTATATGACGACATACAAGATGATGCTGAGAACCTTAGGAATTCTCATCCACCTGGGGCATCAGGTATTGGATCTCTTGGTCATCCTTCATGGTTACAACTTGACACTCAAAAGTCAAGTCCACCACAGACAAGCAGAAACTCAGATTCAACCTCTTCTCAGTCACCTTCTAGTTCTAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTCTTTGGCAAGGATCCGAATGATTTTCCTCTTGTTCTTCGATCACAGGTTCTCAGCTGGTTATCCCATAGTCCCACAGAGATTGAGAGCTATATAAGGCCGGGCTGTATCATATTAACAGTATACCTCTGTCTAGAAAAATCTGCATGGGAGGAGCTCTGCTGTAATTTAGGACTCAGCTTGAAAAAGCTTCTTGCTGCATTGGATGACCCTTTCTGGACAACAGGGTGGGTATATACAAGAGTGCAGCATTCTGTAGCCTTTCTGTACAATGGTCAGGTTGTTTTAGACGTTCCCTTGAGCCTTAGAAGCGCACAATACCGTAAGATTTCATGTATTAAACCACTTGCAGTTTCTTCAACGGCAAGCACTCAATTTGTTGTCAAAGGTGTCAACCTTTTCCATTCTAGCACAAGGTTACTCTGTGCACTTGAAGGGAAGTATCTGGCACAGTATAGTTGTTGTGACTTGATTGATGGTGTTGATACAGCTACTGAACACGATGAGCATCAGTGCCTTAGCTTCTCTTGTACTATACCAAGTGTTACTGGGAGGGGATTTATTGAGGTGGAAGATCATGGTCTTAGCAGCTGTTCCTTTCCTTTTATTGTCGCGGAGCCAGAAATTTGTACAGAGATCTGTAATTTGGAGAGTGTGATTGAGGCAGATGAGATCTGTAAAGATGTACAGATGAGAAGCAAACAAATGGAAGAAAAGACTCAAGCCTTGGATTTCATACAAGAAATAGGTTGGCTCCTTCATAGAAGTCGCACGAAAGCTAGGTTGGGTCCCATGGCACCTGTCCAGGATCCGTTCCATTTCAATCGGTTCAAGTGGCTTGTTGACTTCTGCATGGACCGTGATTGGTGTGCTGTGATGAAAAAGCTTCTGGAAAGTATGTTTGAGGGTACTATTGATGCAGGAGAGCATACCTCTGTCGAGCTTGCATTGCTAAACTTGGGTCTTCTACATAGAGCTGTGAGGAGAAATTGCAGGCCCATGGTTGAACTACTGTTGAAATTTGTACCGGTTCAATGTTCAGCCGATGACAGTAAGGAGAAACAAGTTGGCAAACACTCAGACAGATTCTTATTTAAACCCGATAATGTTGGCCCTGCAGGTTTGACTCCCCTTCATGTTGCAGCAAGCATTCATGGCTCAGAGAATGTATTGGATGCATTGACTGATGACCCTGGAATGGTGGGAATCAAGGCATGGAAAAGTGCCCGGGACAACATGGGTTTGACCCCAGAGGACTATGCATCCATGAGGGGCTACCGCTCCTACATTCAACTCATCCAGATAAAAACAAGTAAGAGAAGTGATGAAACTCATCACCACGTGCTCGACATCCCATCTTCCCTTGTAGATAGTAATACAAAGAAGCAACGGTCATCATCGAAAGTTTCAAGCTTGCAAACCGAGAAGATTGAAATGGCAGAGGCAGCAGCAGCGACGATTCCACATCAGTGCGGGCTATGTCAGCACAAGCTGGCTTGTCACAGCACGAGGACAGCGCTGGTTTATAGGCCAGCAATGCTGTCAATGGTGGCCATTGCAGCTGTATGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTCACCCCAAGTCTCCTATGTCTTCCAGCCCTTCAGATGGGAATCATTAGATTATGGCTCAATGTAG 3108 0.4479 MEAKFRGKSQYVYGPVVPEMKVVGKKSLEWNLEDWKWDGDLFTASPLNSVPSDCRNKQSFPVDPEIPAKANTSSILSSNWDDVNPEKGKRELDKRRRAVISEGDELNDEAGCLNLNLGAQIYPIMEGDAKSGKKTKIVGGGTTSNLAVCQVEDCRADLSNAKDYHRRHKVCEMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPDAVVNGGSLNDERGSSYLLTSLLRILSNMHSNGSDATRDLDILSHLLRNLASLAGTINGRNIASLLEGSQSFVNAGTSGTSQKVPNLNSNGPEPIKSPGSSIKTDNGLSSWDPPKPMGQSEIVPAYDMAQKCSPSGHVGVGSLKSPSGSQPSNVLLSRDSLQPQSVAAETTVRRNGLNHIDLNNVYDDIQDDAENLRNSHPPGASGIGSLGHPSWLQLDTQKSSPPQTSRNSDSTSSQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRSQVLSWLSHSPTEIESYIRPGCIILTVYLCLEKSAWEELCCNLGLSLKKLLAALDDPFWTTGWVYTRVQHSVAFLYNGQVVLDVPLSLRSAQYRKISCIKPLAVSSTASTQFVVKGVNLFHSSTRLLCALEGKYLAQYSCCDLIDGVDTATEHDEHQCLSFSCTIPSVTGRGFIEVEDHGLSSCSFPFIVAEPEICTEICNLESVIEADEICKDVQMRSKQMEEKTQALDFIQEIGWLLHRSRTKARLGPMAPVQDPFHFNRFKWLVDFCMDRDWCAVMKKLLESMFEGTIDAGEHTSVELALLNLGLLHRAVRRNCRPMVELLLKFVPVQCSADDSKEKQVGKHSDRFLFKPDNVGPAGLTPLHVAASIHGSENVLDALTDDPGMVGIKAWKSARDNMGLTPEDYASMRGYRSYIQLIQIKTSKRSDETHHHVLDIPSSLVDSNTKKQRSSSKVSSLQTEKIEMAEAAAATIPHQCGLCQHKLACHSTRTALVYRPAMLSMVAIAAVCVCVALLFKSSPQVSYVFQPFRWESLDYGSM 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0564 1035 SUPERFAMILY SBT domain 147 228 IPR036893 GO:0003677|GO:0005634
Lele24g0564 1035 MobiDBLite consensus disorder prediction 418 474 - -
Lele24g0564 1035 SUPERFAMILY Ankyrin repeat 804 916 IPR036770 -
Lele24g0564 1035 FunFam Squamosa promoter-binding-like protein 14 140 210 - -
Lele24g0564 1035 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Lele24g0564 1035 MobiDBLite consensus disorder prediction 213 233 - -
Lele24g0564 1035 MobiDBLite consensus disorder prediction 301 333 - -
Lele24g0564 1035 Pfam SBP domain 149 222 IPR004333 GO:0003677
Lele24g0564 1035 MobiDBLite consensus disorder prediction 362 397 - -
Lele24g0564 1035 MobiDBLite consensus disorder prediction 365 397 - -
Lele24g0564 1035 MobiDBLite consensus disorder prediction 301 345 - -
Lele24g0564 1035 Gene3D - 140 210 IPR036893 GO:0003677|GO:0005634
Lele24g0564 1035 MobiDBLite consensus disorder prediction 62 90 - -
Lele24g0564 1035 MobiDBLite consensus disorder prediction 439 474 - -
Lele24g0564 1035 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 99 872 IPR044817 GO:0003677
Lele24g0564 1035 Gene3D - 764 920 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0564 Lele-ChrLele24 3749113 3754946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0564 1 1034 SBP-box Gene Family AT3G60030 47.797 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele24g0564 SBP 3.3e-29 No_clan