Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0556 ATGGTGATCGTGAAACTTGGGAACAAGAACAACCAGGAGAAGCAAGGACAGGGAATGCAACTTGGGAAATACGAGCTTGGTAGGACTCTAGGAGAAGGCAATTTCGGGAAGGTCAAATTAGCTAGGAATACCGATTCCGGCCAACCCTTCGCCGTTAAGATCCTCGAGAAGAGAAAGATCCTTGACCTCAATATAACCAATCAGATTAAGAGGGAAATAGCCACCTTGAAGCTCATAAAGCATCCGAACGTGGTCAGATTACACGAGGTCTTGGCTAGCAAGACCAAGATTTATATGGTCCTAGAGTGCGTTACTGGAGGAGAATTGTTTGACAGAATTGCATCCAAAGGCAAACTTCCAGAAGCTGAAGGAAGGAAGCTTTTCCAGCAGTTGGTTGACGGTGTTAGCTACTGTCATGATAAAGGGGTCTTCCACAGAGATCTCAAGCTGGAGAATGTACTTGTGGATGCCAAAGGGAACATAAAGATAACCGATTTTGGCCTAAGTGCTTTACCCCAGCATTTTAGAGCAGATGGTTTGCTGCATACCACCTGTGGAAGTCCCAACTATGTGGCCCCTGAGATTCTTTCTAATAAAGGATATGATGGCGCAACATCAGATACATGGTCCTGTGGGGTCATCTTGTATGTTATCTTAACAGGATATCTTCCTTTTGATGATAGGAATCTTGTAGTTCTCTACCAAAGGATTCTTAAGGGAGATGTTCAGATACCAAAATGGCTATCGCCTGGTGCCAAAAACATAATAAGGAGGATTCTTGATCCCAACCCTGCTACTCGGATCACTATGGCTGGCATCAAACAAGATGAATGGTTCAAGCAGGACTATATTCAAGCAAAGCCAGAGGATGAGGAAGAGGACGTATATATTGACGATGATGCCTTTTCCGAAATCCACGAAATGGCTCACGAAACAGAAGATAAGAGTCCAGGATCACCAACCCTTATCAATGCATTTCAATTGATAGGGATGTCTTCATGCCTTGACCTCTCTGGCTTCTTCGAAAAAGAGGATGTCTCAGAGAGGAAGATAAGATTTACGTCCAACCTCTCCGCAAAAGACTTGATCGAGCGGCTAGAGGACATTGTGACAGAAATGGGATATACAGTCCAAAAGAAAAATGGAAAAGTGAAAGTGATACAAGAGAACAAGGCACGTAAAAATTTAGGCAACCTGACAGTTGCAGCAGAGGTTTTTGAGATAAGCCCATCCTTGTATGTAGTAGAGTTGAGGAAATCCTATGGAGATTCTTCTGTATATAGAAAGTTGTGCGAGAAGTTGTCAAATGATCTGGGGGTTCCGCCAAGAACCGGAGCACTCGTAAGTGGATAG 1353 0.4375 MVIVKLGNKNNQEKQGQGMQLGKYELGRTLGEGNFGKVKLARNTDSGQPFAVKILEKRKILDLNITNQIKREIATLKLIKHPNVVRLHEVLASKTKIYMVLECVTGGELFDRIASKGKLPEAEGRKLFQQLVDGVSYCHDKGVFHRDLKLENVLVDAKGNIKITDFGLSALPQHFRADGLLHTTCGSPNYVAPEILSNKGYDGATSDTWSCGVILYVILTGYLPFDDRNLVVLYQRILKGDVQIPKWLSPGAKNIIRRILDPNPATRITMAGIKQDEWFKQDYIQAKPEDEEEDVYIDDDAFSEIHEMAHETEDKSPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSAKDLIERLEDIVTEMGYTVQKKNGKVKVIQENKARKNLGNLTVAAEVFEISPSLYVVELRKSYGDSSVYRKLCEKLSNDLGVPPRTGALVSG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0556 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lele24g0556 450 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Lele24g0556 450 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 423 - -
Lele24g0556 450 SUPERFAMILY Protein kinase-like (PK-like) 21 302 IPR011009 -
Lele24g0556 450 Gene3D Kinase associated domain 1, KA1 325 440 - -
Lele24g0556 450 FunFam Non-specific serine/threonine protein kinase 17 320 - -
Lele24g0556 450 CDD CIPK_C 324 435 - -
Lele24g0556 450 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0556 450 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0556 450 Gene3D Transferase(Phosphotransferase) domain 1 16 324 - -
Lele24g0556 450 FunFam Non-specific serine/threonine protein kinase 320 441 - -
Lele24g0556 450 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Lele24g0556 450 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Lele24g0556 450 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0556 450 Pfam NAF domain 320 379 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0556 Lele-ChrLele24 3683900 3688387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0556 87 439 CBL-interacting serine-threonine protein kinases AT3G17510 70.538 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele24g0556 Pkinase 2.8e-71 CL0016