Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0553 ATGGTCAACACTCACTCAATGACGGTCAACATGCGTTTGAAGCAACTGAAGTCTTTCTGTGGGAAAACAAGAGAAACAAGTTTATATGGAGATATTATCATTACACCCAAGACAAGAAGTTCAGCAAGTAATCCTGAAAAAGTTCAGGGAGAGTCAGAAAAGAATCAGGATTCAAAGAATAAGATTAAGGAAAAAGATGAAACCACCATCAACACTGTACCTTTTTACAAGCTTTTCTCATTTGCAGATTCTATGGATTATCTGTTGATGCTTGTGGGGACAGTTGGTGCTGTTGCAAATGGAATGGCTATGCCGTTAATGATTCTATTTCTTGGAGATGTGTCATTGAAGTTCGTATACTTGGCAGTTGGTTCCTTTCTTGTGTCATTTCTTCAGGTGACTTGCTGGATGGTCACTGCAGAAAGACAGGCTGCAAGAACAAGAGGTTTATACCTGAAGACAATTTTGAGACAGGACATCAGTTTCTTTGATAAGGAAACTAACACCGGTGGGGTTGTTGGAAGGATGTCAGGGGACACTGTTCTTATTCAAGATGCCATGGGAGAGAAGGCAGGACAGTTCATACAGTGTGTGGCAACTTTTTTCGGAGGTTTTATCATAGCATTTTTCGAGGAATGGCTTCTAACTCTTGTCATGCTATCTTCTATTCCTCCTATTGTCTTCTCTGGTGCTATGATGAACATTGTTCTCGCGAAAGCGACATCCCCTGGACAAAAAGCTTATTCTTCCGCTGCAAGTATAGTAGACCAGACGATTGGTTCTATCCGAACGGTTGCATCATTCACAGGGGAGAAGCACCCTATAGCTAAATATGATCCGCTCTTGATCAAAGCTTACAGGACCATTTGGTATGGTGGGAAAATGGTCCTGGAGAAAGGATATACAGGAGGGAAGGTTATGACTGTAATTTTCTCAGTTGTGACAGGCTCCATCATTAAAGAGAACATTGCCTATGGTAAGGATGGTGCAACAGATGAAGAAATCAGAGCTGCAGCAGAGCTTGCTTATGCTGCAAAATTCATAGATAAACTTCCTCAGGACCCTGATGGAGCCTATAGCCAACTCATTAGATTGCAGGAAACAAAGGAGTTAGAGAATATTAATGCAAATGACACAGATAAACCAGAAAGCATAACGACTTCTGAAAGGCAATCAAGCCAGAGACTTTTTTCCTTGAAATCTGTAAAAGGTGCAGAATCTAATGCTCCTCATTCAAAAGATTCACCAACACCTCCAGAAGTGCCACTTTACTGCCTGGCTTATCTAAACAAACCTGAGATTCCAGTTTTGTTTATAGGGACTCTAGTAGCTGTGGCAAATGCAGCAATATTCCCAGCTTTCGGGTTACTGATCTCCAAAATGATAAACACTCTCTATGAACCTGCAGATAAACTCAGTAAAGATTCAAAGTTTTGGGCATTGATATTTGTTGCCCTTGGTGTGGCATCCTTCTTAGTAATTTCAGCAAAGTTCTACTTTTTTGCTGTTGCTGGTGGTAAGTTGATAAGAAGGATCCGGTTAATGTGTTTTGAGAAGATAATCCATATGGAAGTAAGTTGGTTTCATGAAGCTGAGCATGCAAGTGGAGTCCTTGGAGCCAGGCTATCTATTGATGCAGCTTCTGTCCGAGCTTTGGTTGGAGATGCGCTTGTTTTGCTGGTTCAAAATATTGCTACTGCAATTATTGGCTTGGCCATTGCTTTGGAGGCATGCTGGCAGCTTGCTCTTATAATTCTTGTTATGGTACCCTTATTAGTACTCAATGTATACGCACAGTTCAAGTTCATGGAAGGATTCAGCACAGATGCTAAGAAATTGTTTGAGGAAGCAAGTCAAGTGGCAAATGATGCATTAGGAAGTATTAGAACAATTGCTTCTTTCTGTGCTGAAGTGAAGGTCTTCTTTGCTCTAATTGTAACAGCATTAGGAATCTCCCAATTTAGCTCCAGGGCTCCTGATTCAAGTAACGCAAAGAGTTCTGTTGGTTCTATATTTGCTATTCTTGATGGGAAATCAAAAGTGGACCCAGTGATGACTCTGGAATCACATTGGAACACTTAA 2082 0.4097 MVNTHSMTVNMRLKQLKSFCGKTRETSLYGDIIITPKTRSSASNPEKVQGESEKNQDSKNKIKEKDETTINTVPFYKLFSFADSMDYLLMLVGTVGAVANGMAMPLMILFLGDVSLKFVYLAVGSFLVSFLQVTCWMVTAERQAARTRGLYLKTILRQDISFFDKETNTGGVVGRMSGDTVLIQDAMGEKAGQFIQCVATFFGGFIIAFFEEWLLTLVMLSSIPPIVFSGAMMNIVLAKATSPGQKAYSSAASIVDQTIGSIRTVASFTGEKHPIAKYDPLLIKAYRTIWYGGKMVLEKGYTGGKVMTVIFSVVTGSIIKENIAYGKDGATDEEIRAAAELAYAAKFIDKLPQDPDGAYSQLIRLQETKELENINANDTDKPESITTSERQSSQRLFSLKSVKGAESNAPHSKDSPTPPEVPLYCLAYLNKPEIPVLFIGTLVAVANAAIFPAFGLLISKMINTLYEPADKLSKDSKFWALIFVALGVASFLVISAKFYFFAVAGGKLIRRIRLMCFEKIIHMEVSWFHEAEHASGVLGARLSIDAASVRALVGDALVLLVQNIATAIIGLAIALEACWQLALIILVMVPLLVLNVYAQFKFMEGFSTDAKKLFEEASQVANDALGSIRTIASFCAEVKVFFALIVTALGISQFSSRAPDSSNAKSSVGSIFAILDGKSKVDPVMTLESHWNT 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0553 693 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 319 354 - -
Lele24g0553 693 Gene3D ABC transporter type 1, transmembrane domain 63 319 IPR036640 GO:0005524|GO:0016020
Lele24g0553 693 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 91 290 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g0553 693 MobiDBLite consensus disorder prediction 373 393 - -
Lele24g0553 693 Pfam ABC transporter transmembrane region 115 287 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g0553 693 Pfam ABC transporter transmembrane region 437 637 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g0553 693 Gene3D - 320 354 IPR027417 -
Lele24g0553 693 MobiDBLite consensus disorder prediction 39 64 - -
Lele24g0553 693 CDD ABC_6TM_Pgp_ABCB1_D2_like 427 681 - -
Lele24g0553 693 MobiDBLite consensus disorder prediction 378 393 - -
Lele24g0553 693 SUPERFAMILY ABC transporter transmembrane region 426 676 IPR036640 GO:0005524|GO:0016020
Lele24g0553 693 MobiDBLite consensus disorder prediction 50 64 - -
Lele24g0553 693 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 438 637 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g0553 693 CDD ABC_6TM_Pgp_ABCB1_D1_like 90 317 - -
Lele24g0553 693 SUPERFAMILY ABC transporter transmembrane region 77 314 IPR036640 GO:0005524|GO:0016020
Lele24g0553 693 Gene3D ABC transporter type 1, transmembrane domain 386 686 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0553 Lele-ChrLele24 3653012 3659510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0553 413 653 Calmodulin-binding Proteins AT2G36910 21.073 1.24e-09 60.1