Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0542 ATGAGACCAGGGGAACAAGTTGATGGCCAGCAAGCCCAGTCATCATCATCGTCTTCTTCTCCTTCAATTGATAGCAGTAATTACCTTTCTGGGACTGAGAAACCTGCAGATTCTTCTTCTCACTCTTCTTCCTCTTCGTGTCTCTCAAGTGTTTGTAGAAATGCTAACAGCTCCAGAACTGATTTGATCACTGACCTCAGACTTGGTCTTACCATTTCTCCTTCTCAACCTGGCTTTTCCAATTCAAATCCCAGGCCAAGGAATCAAACTTCAGATTGGCCACCAATCAAGTCCATACTGAGAAGCACTCTTGTGGAGAAACAAAACCAGTGGAGCCAGAGGCCTTCCTTATTTGTCAAAGTGTACATGGAAGGCATACCCATTGGTAGAAAATTGAACCTTCTGGCACACCATAGTTATGATGGGCTTGTTAGAGCCCTATGCCACATGTTCAGGACCACCATTCTCTGCCCCAATTCCCAACCACTTCACTCTGGATATTTTCATGTGCTAACTTATGAGGATCAAGAAGGGGACTGGATGATGGTTGGAGATGTGCCATGGGAGATGTTCTTGACCAGTGTGAAAAGGCTGAAGATCACCAGAGCAGACAGATGCTAG 621 0.4541 MRPGEQVDGQQAQSSSSSSSPSIDSSNYLSGTEKPADSSSHSSSSSCLSSVCRNANSSRTDLITDLRLGLTISPSQPGFSNSNPRPRNQTSDWPPIKSILRSTLVEKQNQWSQRPSLFVKVYMEGIPIGRKLNLLAHHSYDGLVRALCHMFRTTILCPNSQPLHSGYFHVLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0542 206 Pfam AUX/IAA family 52 202 IPR033389 -
Lele24g0542 206 SUPERFAMILY CAD & PB1 domains 109 200 - -
Lele24g0542 206 MobiDBLite consensus disorder prediction 7 50 - -
Lele24g0542 206 MobiDBLite consensus disorder prediction 1 50 - -
Lele24g0542 206 Gene3D - 111 206 - -
Lele24g0542 206 MobiDBLite consensus disorder prediction 73 94 - -
Lele24g0542 206 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 63 204 IPR003311 GO:0005634|GO:0006355
Lele24g0542 206 ProSiteProfiles PB1 domain profile. 116 205 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0542 Lele-ChrLele24 3591307 3592618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0542 106 206 B3 DNA Binding Superfamily AT2G46530 34.314 2.89e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele24g0542 AUX_IAA 3.5e-34 CL0072