Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0539 ATGTGTTTTCTGTTATCTGTGATCGTGACATTCCGACTAATGTCTTTGGTGGTTGTCATTTCAGAAGCAGATATGATGGAAGGTTCAGAGAAGATTAGTCATCTAACATTACTGCTGATGATGATGATAATCTTATGCATACCAGTTATTGCAGATGGCAAGCATGTAAGCATCAAGAACAGCTTAGGATCTGGGAAGAACATGAGCCTGCATTGCCAATCCAAAGATAATGATCTGGGGGAACATAACATAGAAGATGGAGATGAATTTGTCTGGGATTTCAATGACAATGTGACTGGTACCACACTGTTTTTCTGTGATCTGGAGTGGGAAAGTGTTCATCAGTACCATTTTGATGCTTATGAATTTGGCAGAGACTTTGCCAGGTGTAACACCGGATGTGCATGGCTTATATCAACTGAAGGCGTCTATGGTTTAAATGGACAAACGAGGTACTGGGAATTCATATACAACTGGCCTACAAGTTGA 489 0.4049 MCFLLSVIVTFRLMSLVVVISEADMMEGSEKISHLTLLLMMMIILCIPVIADGKHVSIKNSLGSGKNMSLHCQSKDNDLGEHNIEDGDEFVWDFNDNVTGTTLFFCDLEWESVHQYHFDAYEFGRDFARCNTGCAWLISTEGVYGLNGQTRYWEFIYNWPTS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0539 162 PANTHER - 50 149 IPR010264 -
Lele24g0539 162 Pfam Plant self-incompatibility protein S1 55 159 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0539 Lele-ChrLele24 3570483 3571519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0539 56 159 Carbohydrate Esterase AT3G16970 32.710 1.88e-11 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0539 21 3581706 3582564 Lele24g0539 24 3570483 3571519 hybridization
Lele22g0552 22 3578852 3579268 Lele24g0539 24 3570483 3571519 hybridization