Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0537 ATGGAGGGAAAGCTTGACTCTGATGATGGCGTGAAGCCCGTTACAGAGCAAGGAGCCGGACGAGAGAACGGCCAAGACGTGGTGTTTCCAGAATCTTCTCCTCTCACAGCGAATTCTGGCAAAAATGTTGACGGTGATGCTTGCAACGGAGAGGCTGTTGAAGAATCTGCAGGAGATTTATTGGGAAAGAAGCATCTCTCTGCAAGCAGGTCAATGCCAGCATCTAGACCAACTCAGCTCACCATCTTCTTTAATGGGAATGTTTGTGTCTATGATGGAATTCCTGCAGAGAAGGTGCATGAGATAATACATATGGCTGCTTCTGCTGCTAAGTCTGCTGACATGAAGAGTGGAATACAATCCTCCTTTACTTCACCCATTCCCACAAGGCCATCTTCTCCACAGGGAACCCCTAATAATGTGACTTCACCAAAACCTCTCTGTTTTCCTGGGCAGAAGAGTTCCATTTGTGGGTTGCAAGAATTTCCAATTGCACGCAGACAGTCACTGCAGCGCTTTCTTGAGAAGCGACGAGATAGGTTGGGGAGCAGAGCCCCATATGCTTCTCCGGCAAGAACTAAAGTGTCTGAAAATACAGAGAACAGCTGCAGTGCTGATAATGCACCTGATCTGATTTCCTTCAAACACTCAGAGGAGGAGATTCAACCTAGTGTCACTGCCTCTTAA 687 0.4731 MEGKLDSDDGVKPVTEQGAGRENGQDVVFPESSPLTANSGKNVDGDACNGEAVEESAGDLLGKKHLSASRSMPASRPTQLTIFFNGNVCVYDGIPAEKVHEIIHMAASAAKSADMKSGIQSSFTSPIPTRPSSPQGTPNNVTSPKPLCFPGQKSSICGLQEFPIARRQSLQRFLEKRRDRLGSRAPYASPARTKVSENTENSCSADNAPDLISFKHSEEEIQPSVTAS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0537 228 MobiDBLite consensus disorder prediction 181 228 - -
Lele24g0537 228 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 49 200 IPR040390 -
Lele24g0537 228 MobiDBLite consensus disorder prediction 1 51 - -
Lele24g0537 228 Pfam Jas motif 163 187 IPR018467 -
Lele24g0537 228 MobiDBLite consensus disorder prediction 192 208 - -
Lele24g0537 228 MobiDBLite consensus disorder prediction 118 147 - -
Lele24g0537 228 Pfam tify domain 75 107 IPR010399 -
Lele24g0537 228 ProSiteProfiles Tify domain profile. 73 108 IPR010399 -
Lele24g0537 228 SMART tify_2 73 108 IPR010399 -
Lele24g0537 228 MobiDBLite consensus disorder prediction 29 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0537 Lele-ChrLele24 3563095 3565704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0537 44 187 Tify Gene Family AT5G20900 44.000 5.48e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele24g0537 tify 1.1e-15 No_clan