Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0532 ATGGCCCTTTCTTCTTCAACCAAATTAGTGTCTGGATTCTGGGTGATGCTGCTTATTCTGGGTCTGTTGACCCCTATTGGTAATGGTCGTGGTGGCAATGATCTTAAGGGGTTACAGTTCTTGAAGGTTCCGTCTTCAGATTTCAGAAACTCTGTTCAAGGAGTCGTGGGTGTTTTGCTTCATGCTGCTTCCATCTTGTCTAGGTTTCCCAATGGACGAGATTTTCGTCTCTCCAATGCCATTTCCGACTGCATGGACTTGCTCGATTTGTCTTTTGATGCTCTCCAGTTGTCTGCCTCCGCTACTGAGACTCCTACAGGCCACAGAAACGGTACGGGGAACTTGGGCTCTGATCTGAGAACATGGCTGAGTGCGGCACTTGCACATCCACAGACATGCATGGAAGGGTTCGAAGGCATCCATAGCCTTATTGATAATATGGTGTCATCTCTTCTAAGCCAAATGATCTCATTGATCCAACAACTCCTAACTCAGGTTCAACATGTTCCGGATGAGTTCCCTACAACTACAACAAGTAAGGTAAAGTTTCCTTCATGGATCAAACCAAGAGAACAGAAGCTTCTACGATCAAGTGAGATTAATCCGGATGTTGTAGTAGCAGGAGATGGAACTGGGACTTTCACTAAAGTATCAGATGCAGTGGAAGCAGCTCCTGATTATAGCATGAAACGTTTTGTGATTTACGTAAAGAGGGGTCTGTACAAAGAGAATGTGGATATCAAGAAGAAGAAATGGAACATCATGATGATTGGTGATGGCATGGATGACACTGTTATCTCCGGTAATCGTAACTTCAACCAAGGTTGGACCACCTACCGAACAGCTACTTTCGGCGTTAGAGCGAGAGGATTCATAGCACGTGACATTACCTTCCAGAACACGGCAGGTCCACATAATCACCAAGCAGTGGCACTGAGATCAGATTCTGACCTATCAGTGTTCTACCGCTGTGGCATCTATGGCTACCAAGACAGTCTCTTCACACACACAATGCGACAATTCTACAGAGAATGTCGAATAAAAGGCACAGTGGATTTCATCTTCGGAGATGCCACAGCAGTGTTCCAGAAGTGCCAGATTCTGGCCAGAAGAGGGCTTCCAGGTCAGAAAAACGTAATCACAGCTCAAGGAAGAAAAGACCCACACGAACCAACTGGATTCTCCCTCCAATTCTGCAAAATCTCTGCAGATTCCGACCTTCTTCCTTACGTTGGATCCACCGACACATACCTGGGGAGGCCCTGGAAGGCATTTTCTCGAACAGTTTACATGCAAACCTACATGAACGACTTGGTGAATCCCCAAGGGTGGCTCGAGTGGAACGGCGATGATTCTTCGGTGAAAACACTTTATTATGCGGAGTACATGAACGGTGGTCCAGGGGCTGCTCTGGAGAAGCGAGTGAAATGGCCAGGGTTTCATGTGTTGGAGGAGGCGGAGGAGGCTTATCTCTTCACAGTGGCTCGTTTTCTTGATGGGAATCTATGGCTGCCTCGCACAGGGGTCATGTACACAGCGGGTTTAGGCGATTGA 1554 0.4717 MALSSSTKLVSGFWVMLLILGLLTPIGNGRGGNDLKGLQFLKVPSSDFRNSVQGVVGVLLHAASILSRFPNGRDFRLSNAISDCMDLLDLSFDALQLSASATETPTGHRNGTGNLGSDLRTWLSAALAHPQTCMEGFEGIHSLIDNMVSSLLSQMISLIQQLLTQVQHVPDEFPTTTTSKVKFPSWIKPREQKLLRSSEINPDVVVAGDGTGTFTKVSDAVEAAPDYSMKRFVIYVKRGLYKENVDIKKKKWNIMMIGDGMDDTVISGNRNFNQGWTTYRTATFGVRARGFIARDITFQNTAGPHNHQAVALRSDSDLSVFYRCGIYGYQDSLFTHTMRQFYRECRIKGTVDFIFGDATAVFQKCQILARRGLPGQKNVITAQGRKDPHEPTGFSLQFCKISADSDLLPYVGSTDTYLGRPWKAFSRTVYMQTYMNDLVNPQGWLEWNGDDSSVKTLYYAEYMNGGPGAALEKRVKWPGFHVLEEAEEAYLFTVARFLDGNLWLPRTGVMYTAGLGD 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0532 517 Gene3D - 197 515 IPR012334 -
Lele24g0532 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 167 IPR035513 -
Lele24g0532 517 PANTHER PECTINESTERASE 74 505 - -
Lele24g0532 517 FunFam Pectinesterase 197 515 - -
Lele24g0532 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 158 IPR035513 -
Lele24g0532 517 SUPERFAMILY Pectin lyase-like 200 514 IPR011050 -
Lele24g0532 517 CDD PMEI-like_4 39 167 - -
Lele24g0532 517 ProSitePatterns Pectinesterase signature 2. 347 356 IPR033131 -
Lele24g0532 517 SMART PMEI_2 43 169 IPR006501 GO:0004857
Lele24g0532 517 Pfam Plant invertase/pectin methylesterase inhibitor 74 157 IPR006501 GO:0004857
Lele24g0532 517 Pfam Pectinesterase 203 501 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0532 Lele-ChrLele24 3506789 3508907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0532 11 515 Carbohydrate Esterase AT3G43270 56.867 0.0 611