Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0524 ATGGGGAGAGAAAGAGAGGTGTCGAAGCAGCAACAGGTGGGATACGCGGAGCAGCTTGTCGCCGTTAATCGCTATAATCCTGACATCCTTCCCGATCTCGAAAACCATGTTAACGAGCAGGTTTCATCACAAACATACAGCTTGGATGCGAATCTATGCCTTCTTCGCCTCTATCAGTTTGAACCAGACAGAATGAGCTCTCAGATTGTAGCCCGCATATTGGTTAAGGCCCTCATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTCTGATTCCAGAACGTGTGCAAATGGAGGAGCAATTCAAGACACTGATTGTTTTATCACACTATTTGGAGACTGGAAGATTTCGCCAGTTTTGGGATGAAGCAGCAAAGAGTCGTCATATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCAATTCAAGATTATTCGATCCATGTCCTCTCGTTAACATACCAAAAAGTTCCTAGATCTGTGCTGGCTGAGGCCATCAACATAGAAGGCTTGGCCTTTGACAAATTCCTTGAACTCCAAGTAGCCAACAGTGGTTGGGTCATTGAGAAAGGCCATGGCAAGGGTCAACTCATTGTCTTACCAAGAAATGAATTCAATGACCCAGCATCGAAGAAAAACGCTGCAGACAGTGTGCCATTGGAGCAAATTACACGCATTTTCCCTATTCTGAGTTGA 696 0.454 MGREREVSKQQQVGYAEQLVAVNRYNPDILPDLENHVNEQVSSQTYSLDANLCLLRLYQFEPDRMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQDYSIHVLSLTYQKVPRSVLAEAINIEGLAFDKFLELQVANSGWVIEKGHGKGQLIVLPRNEFNDPASKKNAADSVPLEQITRIFPILS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0524 231 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 7 231 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lele24g0524 231 ProSiteProfiles PCI domain profile. 46 205 IPR000717 -
Lele24g0524 231 FunFam Eukaryotic translation initiation factor 3 subunit K 8 124 - -
Lele24g0524 231 Gene3D - 127 230 IPR036388 -
Lele24g0524 231 SUPERFAMILY "Winged helix" DNA-binding domain 136 228 IPR036390 -
Lele24g0524 231 Gene3D ARM repeat; domain 1 7 124 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Lele24g0524 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 11 228 IPR009374 GO:0003743|GO:0005737|GO:0005852
Lele24g0524 231 FunFam Eukaryotic translation initiation factor 3 subunit K 127 230 - -
Lele24g0524 231 SUPERFAMILY ARM repeat 10 133 IPR016024 -
Lele24g0524 231 Pfam CSN8/PSMD8/EIF3K family 66 190 IPR033464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0524 Lele-ChrLele24 3460696 3463215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0524 1 231 Eukaryotic Initiation Factors Gene Family AT4G33250 72.294 7.49e-123 346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0524 24 3460696 3463215 Lele24g0524 24 3460696 3463215 ECH
Lele21g0521 21 3451979 3454535 Lele24g0524 24 3460696 3463215 hybridization
Lele22g0538 22 3467118 3469647 Lele24g0524 24 3460696 3463215 hybridization