Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele24g0516 | ATGCCTTTCCCTCTCCTCCTCCTCCCCTTCCTACTCCTCTCTCCTCCCCTCTCCCACTCCGCAGCCCCTCCCCCTCCCCCTCCACCCTCCTCCGATCTCCTCCTATCCTCATGCGTCCACGCCAGGTACCCCCATCTCTGCCTCCGTACTCTCTCCTCCTACGCCCACCCCTCCATCACCCCCAAGGACCTCGCTAGGGCCGCCCTCAACGTCAGCCTCGGTCACGCTCGCCACATCTCCCGCTTCCTCCACTCCCATCTTCCCCCCTCCCCCTCCAAGCCATCGCACCGCCGCCGCCAATCCGCTCTCCATGACTGTGCCGAGCAGATATCCGACTCCGTCGACCAGCTGAGCAGGAGCCTCGGGGAGCTGAAGCACCTCCGCAAGTCGACGTTTCAGCTGCAGTTGAGCAACGCCCAGACCTGGGTGAGCGCCGCTATGACCGACGACGACACCTGCCTCGACGGTCTGAGCCCCGTCCACGATCGTGTGGTCAGGAAGATAAAGCGCAAGATCAGCCGGGTGGCCAGGGTCACCAGCAACGCCCTCTACATGATCAACCGCCTCTGCAGCGGCCGTCCGATGCAAAAGTCCGAACCCTACGATTAA | 609 | 0.6388 | MPFPLLLLPFLLLSPPLSHSAAPPPPPPPSSDLLLSSCVHARYPHLCLRTLSSYAHPSITPKDLARAALNVSLGHARHISRFLHSHLPPSPSKPSHRRRQSALHDCAEQISDSVDQLSRSLGELKHLRKSTFQLQLSNAQTWVSAAMTDDDTCLDGLSPVHDRVVRKIKRKISRVARVTSNALYMINRLCSGRPMQKSEPYD | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele24g0516 | 202 | CDD | PMEI-like_3 | 38 | 189 | - | - | |
| Lele24g0516 | 202 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 32 | 189 | IPR035513 | - | |
| Lele24g0516 | 202 | Pfam | Plant invertase/pectin methylesterase inhibitor | 35 | 184 | IPR006501 | GO:0004857 | |
| Lele24g0516 | 202 | SMART | PMEI_2 | 29 | 185 | IPR006501 | GO:0004857 | |
| Lele24g0516 | 202 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 1 | 189 | IPR006501 | GO:0004857 | |
| Lele24g0516 | 202 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 5 | 184 | - | - | |
| Lele24g0516 | 202 | FunFam | Pectinesterase inhibitor 3 | 30 | 190 | - | - | |
| Lele24g0516 | 202 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 30 | 190 | IPR035513 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele24g0516 | Lele-ChrLele24 | 3372510 | 3373118 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele24g0516 | 13 | 189 | Carbohydrate Esterase | AT3G14310 | 28.723 | 7.14e-18 | 79.3 |