Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0511 ATGGTAGAATCCAACGATCTGGTGGAACATATGGTTTATGAGATTCTTCAAAAGTTATTGCATCGGTTTCACTGGATTGTACCTGGATATGTAATGGGTGGTGAAAGTAGGTCAAAAGAAAAGGCCAGGTTGCGCAAAGGCATATCGATTCTTGTAGCAACTCCTGGGCGCCTTTTAGATTACTTGAAGAATACATCATCATTCTTGTACACCAATTTGCGTTGGATAATCTTTGATGAAGCTGATAGGATTTTGGAATTAGGATTCGGAATAGAAATAAAGGAAATACTAGATCATTTAGATACAAAAACAGGCTGTGCTAACCAAGAGAATGCAGTTTCAAGGCACTCTGGAGCTCTGAGACAGAATCTGCTCTTATCAGCTACTTTAAATGAAAAAGTGAATCATCTTGCTAGAATTAGTCTAGAGAATCCTGTGATGATTGGTCTTGATGGCAAAGGGATAGAACCAATTTCAATGAATGAGAGCCTTGGTTCTTCAGAATCTGATGAGGAGAGTGAAGACAATGAAGAGAAGTATCGCAGTAACATGCTGCATACACCTGCTGGAGATTATAAAGTTCCCACACAATTGATTCAGAGATACGTTAAAGTACCTTGTGGCGCACGTCTTGCTGTTCTTCTCTCAATTTTGAAGTATCTTTCTGAAAGGGAAGCTTCACAAAAGATTGTGGTATTCTTTTCAACATGTGATGCAGTAGACTTTCACTTTTCACTGTTAAGTGAATTCCAGATTTCTTATCCACAATCAGAAGCAGATGGTAGACAGATGTTTCTGGGAGGACTGGATTTTCCGAAAGTCAGATGCATTATACAATATGATTTCCCAGGGGAACCCACTGAACATGTGCATAGAGTTGGTAGAACTGCTCGGCTGGGTGAAAGAGGAGAGTCATTGTTATTTCTGCAGCCAGTTGAAATAGATTATTTACTGGACTTGGAAAAACATGGGGCATCATTAACAGAGTATCCTCTCCTCAAAGTGTTGGATAGTTTCCCACTATATGGTCAAAAGAAGCACATCAAGAATTTTGTTGCCATAGAGTCACATCCCTGGGTCATTTGTCTTCAGACGGCTCTTGAATCCTTCAGCATGTCTGAGCCCAAAATTGATAAACTTGCCAAGAGGGGATGTTGCTCTTGGGTCCGTGCCTACACAACCCATCGTGGTGAGTTGAAAAAGATATTTATGATCAAGAAACTCCACTTGGGGCATGTAGCGAAAAGCTTTGCCCTTAAACAACAACCTTCCTTAGTTGCAAAGTAA 1287 0.4033 MVESNDLVEHMVYEILQKLLHRFHWIVPGYVMGGESRSKEKARLRKGISILVATPGRLLDYLKNTSSFLYTNLRWIIFDEADRILELGFGIEIKEILDHLDTKTGCANQENAVSRHSGALRQNLLLSATLNEKVNHLARISLENPVMIGLDGKGIEPISMNESLGSSESDEESEDNEEKYRSNMLHTPAGDYKVPTQLIQRYVKVPCGARLAVLLSILKYLSEREASQKIVVFFSTCDAVDFHFSLLSEFQISYPQSEADGRQMFLGGLDFPKVRCIIQYDFPGEPTEHVHRVGRTARLGERGESLLFLQPVEIDYLLDLEKHGASLTEYPLLKVLDSFPLYGQKKHIKNFVAIESHPWVICLQTALESFSMSEPKIDKLAKRGCCSWVRAYTTHRGELKKIFMIKKLHLGHVAKSFALKQQPSLVAK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0511 428 Gene3D - 1 150 IPR027417 -
Lele24g0511 428 Pfam Domain of unknown function (DUF4217) 364 424 IPR025313 -
Lele24g0511 428 Gene3D - 265 425 IPR027417 -
Lele24g0511 428 CDD SF2_C_DEAD 198 309 - -
Lele24g0511 428 Pfam Helicase conserved C-terminal domain 268 300 IPR001650 -
Lele24g0511 428 PANTHER RNA HELICASE 12 353 - -
Lele24g0511 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 321 IPR027417 -
Lele24g0511 428 Pfam DEAD/DEAH box helicase 14 136 IPR011545 GO:0003676|GO:0005524
Lele24g0511 428 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 77 85 IPR000629 -
Lele24g0511 428 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 148 IPR014001 -
Lele24g0511 428 MobiDBLite consensus disorder prediction 160 180 - -
Lele24g0511 428 SMART DUF4217_3 362 427 IPR025313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0511 Lele-ChrLele24 3341499 3345025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0511 32 332 Eukaryotic Initiation Factors Gene Family AT3G19760 22.403 3.16e-12 65.9