Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0510 ATGTTTGGGCCTAGAGAATCATTAAAATCATGTTCGCATCGGGCTTTTTCGTTCCCTGAAAAGCAGCGCGAAACGCGAATTTCAGTGGAATCTGAGGTGAATTTGGGGCCCAGAAGAAGCCCATTCTCTTGGAATTTACTCCTGATCAAGATTGATCCTACTGAGAGGGGGGCAGAAAGTAAAGGAGATTCTTCACCTTGGTGGTTGTCTTTAGAGAATTGTCTATCTGTGAAGAGTTTGGTCGTCATGAAGGCTTTACCGAATGGATACTTGCCTAACTCTGGCGAAGGAGAAAGAAAAACAATCAACTCAGAGTTATGGCATGCATGTGCTGGACCCTTGGTTTCCTTACCTCCTGTTGGAAGTCTTGTCGTTTATTTCCCCCAAGGACACAGCGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCTGATTTCATACCCAGTTATCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGCTGCACTGCATGCTGATCCAGAAACTGATGAGGTCTATGCACAGATGACCCTTCAACCTGTAAATAAATATGACAAAGAAGCAATACTGGCATCAGACATGGGTCTGAAGCAAAGCCGACAGCCTGCTGAATTCTTCTGCAAGACTCTTACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTACCTCGTAGAGCAGCAGAGAAAATATTTCCACCTCTGGATTTTTCAATGCAACCTCCTGCTCAGGAGATTGTTGCCAAGGATTTGCATGACAGTACATGGACATTCAGACATATTTATCGCGGACAACCCAAGAGACATCTGCTGACTACTGGTTGGAGTGTCTTTGTCAGCACAAAAAGACTATTTGCTGGAGATTCTGTTCTTTTTATTAGAGATGGAAAACAGCAGCTTCTTGTGGGCACTAGGCGTGCTAATAGACAGCAGTCTGCTCTCTCTTCATCAGTCATATCCAGTGACAGCATGCATATAGGCATTCTTGCTGCTGCAGCTCATGCTGCTGCAAATAACAGCCCATTTACCATATTTTACAATCCGAGGGCTAGCCCTGCTGAATTTGTAATCCCATTGGCCAAGTATAATAAAGCCATGTACACCCAAGTTTCCCTTGGAATGAGGTTTAGAATGATGTTTGAGACTGAGGAGTCAGGAGTTCGTCGATACATGGGTACAATCACAGGGATCAGTGACTTGGATCCTGTGCGGTGGAAAAATTCACAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGCGAGCGCCCAAGCAGAGTATCAATTTGGGACATTGAACCGGTAGTAACTCCTTTCTACATTTGCCCACCTCCTTTCTTCAGGCCCAGGTTCTCCAAGCAACCAGGAATGCCAGATGATGAGTTTGACATGGAAAATGCATTCAAGAGAGCTATGCCCTGGCTTGGAGATGAATTTGGCATGAAAGATGCCTCAAGTTCAATGTTTCCTGGTTTGAGTTTAGTTCAGTGGATGAGCATGCAGCAGAATACCCAGTTATCTGCTGCACAATCAGGAATGTTCCCATCTCTGCTTTCATCCAATTCCCTTCATAATAACCTCAGCACTGATGACCCATCCAAATTATTGAGTTTCCAAAACCCTGTCCTCTCTGCATCAAATCTTCAATTTAGCAGACCAAATTTACCAAACCAAGTCAATCAATTGCAACAAGCCCCAACATCATGGCCTCAGCAGCCACAGCAGCAGCAGCAGATGCAGTCCTTGATGCAAGCACCTGCAAACCAGCTCCAGCAGCAGAGGCAGCAGCTACAGCCGCAGCAGCTTCCTGAGCCACAAAATCTGACACAGCAGCAACAGCAGCAGCAGCCCCAATTGCAGCAACAGCTAGTACAACCACCCCAGCAGCAGCAACCGCAGCCATGCCAACAGGCCATTATAAACAATGGGGTGATCGGTTCTAGTCAGATTCCAAATCAGAGTATGCAACAATCCATAGCCTACTCTCAGCTTCAGCAGCAGCAGTTACTCTCAGCCAGCATGCCACTTCAGCAAAATATTCAATCAGCTAGCAAAAATACATTCCCGCTTACAACCTTACCGCAAGATACACAGTTTCAGCCACAGATAGACCAGCAAGCTACTCTCTTGCAGAGGCAACAGCAGCAATCCCAATTGCAGTTATTGCAACAAAGCTTGTCACAGAGGGCCCCACAACAACCACAAGTGGCTCAACTGCCACAACAAAACTTGTCAGAACAACAGTTGCAGTTACAGTTGCTACAAAAATTGCAGCATCAGCAGCAACATCAGCAATTTCTTTCTCCAACTAGTTCAATTTTGCAGCCGCAGCTACTACAGCAACAGCAAGCACACCTACAAAACCAACAACTACCACAACCGCCTCTATCTCAGCATCAGCCTCAGCAGCTCAGCAACAATGCATTATCTGCAGAGAAGCTTCTGGTCAGCAACGGCTTTTCTTCTTCACCTCTGATGCAACCACAACAGCTTCCTTTAAACCAAGCCCAGAATATACCGAAACCACTTACAACTACCAGAGCTCCTTCTAATCTTACAGATGGAGATGCCCCATCATGTTCAACCTCGCCATCAACTAATAACTGCCAGGTATCTCCACCAAACCTGAAGAGAAATCAACAAGTGCCGGCAACATTAGGGGGGAGCTTGGTAGTTGAGCCCACTAATAATCTGGTACAGGAGCTGCAGGGGAAGTCTGACATACAGATCAAACATGAGTTACCAGGTGTAAAAGGGCCTGACCAGCTAAAGTATAAAGGGACAATAACTGATCAATTGGAAGCCTCTTCTTCTGGAACATCTTACTGTCTGGATCCTTGCAGTGTGCAACCTAATTTCCCCCTTCCCAATTTCTGCATGGATGGGGATGTCCAATCGCATCCTAGGAACAGTCTTCCATTTGCATCTAATCTTGATGGACTAACGCCTGATACTTTGCTATCAAGAGGGTATGACTCGCAAAAAGATCTTCAAAATTTGCTCTCTAACTATGGTGGTGCTCCAAGAGATATAGAAACTGAGCTGTCAACTGCTGCTATCAGCTCACAGTCATTTGGTGTGCCAAGCATGCCCTTTAAGCCTGGCTGCTCAAATGATGTTGGCATCAATGATACTGGGGTTTTGAATAATAGCTTGTGGGCTAACCAGACTCAACGAATGCGAACATATACTAAGGTTCAAAAACGTGGCTCTGTTGGAAGGTGCATTGATGTCACTCGTTACAAGGGATATGATGAACTCAGACATGACCTGGCTCGCATGTTTGGGATTGAGGGGCAACTGGAAGATCCTCAAAGGACTGACTGGAAACTAGTATATGTAGATAATGAAAATGACATTCTCCTTGTTGGAGATGACCCTTGGGAAGAATTTGTTAGCTGTGTTCAGAGCATAAAGATACTGTCATCTGCTGAAGTACAGCAAATGAGCTTAGACGGGGATTTGGGTAATGTTCCAATATCCAACCAAGCTTGTAGTGGGACAGATAGCGGTAATGCATGGAGGGGACAATACGACGATAACTCAGCCGCCTCATTTAATCGATAA 3579 0.4554 MFGPRESLKSCSHRAFSFPEKQRETRISVESEVNLGPRRSPFSWNLLLIKIDPTERGAESKGDSSPWWLSLENCLSVKSLVVMKALPNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHNAALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKQQLLVGTRRANRQQSALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPAEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPRFSKQPGMPDDEFDMENAFKRAMPWLGDEFGMKDASSSMFPGLSLVQWMSMQQNTQLSAAQSGMFPSLLSSNSLHNNLSTDDPSKLLSFQNPVLSASNLQFSRPNLPNQVNQLQQAPTSWPQQPQQQQQMQSLMQAPANQLQQQRQQLQPQQLPEPQNLTQQQQQQQPQLQQQLVQPPQQQQPQPCQQAIINNGVIGSSQIPNQSMQQSIAYSQLQQQQLLSASMPLQQNIQSASKNTFPLTTLPQDTQFQPQIDQQATLLQRQQQQSQLQLLQQSLSQRAPQQPQVAQLPQQNLSEQQLQLQLLQKLQHQQQHQQFLSPTSSILQPQLLQQQQAHLQNQQLPQPPLSQHQPQQLSNNALSAEKLLVSNGFSSSPLMQPQQLPLNQAQNIPKPLTTTRAPSNLTDGDAPSCSTSPSTNNCQVSPPNLKRNQQVPATLGGSLVVEPTNNLVQELQGKSDIQIKHELPGVKGPDQLKYKGTITDQLEASSSGTSYCLDPCSVQPNFPLPNFCMDGDVQSHPRNSLPFASNLDGLTPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAISSQSFGVPSMPFKPGCSNDVGINDTGVLNNSLWANQTQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDNENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGNVPISNQACSGTDSGNAWRGQYDDNSAASFNR 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0510 1192 SUPERFAMILY CAD & PB1 domains 1078 1143 - -
Lele24g0510 1192 SUPERFAMILY DNA-binding pseudobarrel domain 198 337 IPR015300 -
Lele24g0510 1192 Pfam B3 DNA binding domain 208 309 IPR003340 GO:0003677
Lele24g0510 1192 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 98 680 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele24g0510 1192 Gene3D - 371 442 - -
Lele24g0510 1192 ProSiteProfiles PB1 domain profile. 1065 1158 IPR000270 GO:0005515
Lele24g0510 1192 Gene3D - 206 309 IPR015300 -
Lele24g0510 1192 Pfam AUX/IAA family 1062 1151 IPR033389 -
Lele24g0510 1192 Gene3D - 1060 1154 - -
Lele24g0510 1192 SMART B3_2 208 310 IPR003340 GO:0003677
Lele24g0510 1192 MobiDBLite consensus disorder prediction 844 879 - -
Lele24g0510 1192 FunFam Auxin response factor 1060 1154 - -
Lele24g0510 1192 FunFam Auxin response factor 206 310 - -
Lele24g0510 1192 Pfam Auxin response factor 334 416 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele24g0510 1192 MobiDBLite consensus disorder prediction 563 638 - -
Lele24g0510 1192 ProSiteProfiles B3 DNA-binding domain profile. 208 310 IPR003340 GO:0003677
Lele24g0510 1192 MobiDBLite consensus disorder prediction 783 807 - -
Lele24g0510 1192 CDD B3_DNA 207 299 IPR003340 GO:0003677
Lele24g0510 1192 FunFam Auxin response factor 371 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0510 Lele-ChrLele24 3320304 3328609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0510 83 569 B3 DNA Binding Superfamily AT1G19220 82.341 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele24g0510 AUX_IAA 1.3e-09 CL0072