Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0506 ATGTCGAGCTCCTCGGATTTTTCCGGCCAGAAGCCGGAGAAGCCATCTTTCTCCCAGACTTGCAGTCTGCTGAGTCAATACCTGAAGGAGAACGGCAGCTTTGGAGATCTTACCCTCGGGATGACGCGCGGCAGCGAAGCAATTGGGTCAACTGAAGCATCTTGTCAGACTGCGACAACCATGGACTTATTTCCAACCAAGGAAAACACTGTAATAACACAGGATTTACTCTCTAATTCCAGTGTTCCTAAGCCTGTGACTAAGGATCCTAAAGCTCCACAATTGACAATCTTTTACGGAGGACAAGTCATTGTTTTCGATGATTTTCCGGCCGAGAAAGCCAAGGAGATCATGTCTTTTGCCAGCAAAGGAAACTCCCAAAGCCAGAACCCCTCTGTTTACACTTTTGCTCAGAGCGCACCTTCGTTTCCTGGTAATTTGGTCAGAGCCTCAGCTGATCCAAGCGCTTCAATCACTCCTCGTACTCAAGCACCATCCAGACCTGTTACTTGTGATCTACCTATTATGCGTAACGCATCGCTTCACCGGTTCTTGGAGAAGAGAAAAGATAGAATTGCTGCCAAAGTACCATATCAAACAAGCAAAGCCACGGTGGGTCATAGCAAGCCAGTAGAGTCAATGCCATGGCTGGGCGTAGCTGCTAAGTCACCACAAAACTGA 681 0.4787 MSSSSDFSGQKPEKPSFSQTCSLLSQYLKENGSFGDLTLGMTRGSEAIGSTEASCQTATTMDLFPTKENTVITQDLLSNSSVPKPVTKDPKAPQLTIFYGGQVIVFDDFPAEKAKEIMSFASKGNSQSQNPSVYTFAQSAPSFPGNLVRASADPSASITPRTQAPSRPVTCDLPIMRNASLHRFLEKRKDRIAAKVPYQTSKATVGHSKPVESMPWLGVAAKSPQN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0506 226 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 204 IPR040390 -
Lele24g0506 226 SMART tify_2 88 123 IPR010399 -
Lele24g0506 226 Pfam tify domain 90 122 IPR010399 -
Lele24g0506 226 Pfam Jas motif 174 199 IPR018467 -
Lele24g0506 226 ProSiteProfiles Tify domain profile. 88 123 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0506 Lele-ChrLele24 3287259 3288852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0506 1 222 Tify Gene Family AT1G19180 40.909 3.22e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele24g0506 tify 1.5e-18 No_clan