Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0503 ATGGCCGCTGTTCGACCCCGCATTTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCACCCTTCCTTCTTTCTCTTCTTCTTCCGACACCGATGCCCTCCTCAAGCTCAAGCAGTCATTCACCAATGCTGCTTCTCTTTCTTCCTGGGTCCCTAATTCTCCCCCCTGCCGATGGGCCGGAATCATGTGCGACAACAACATCATCATCGGTCTTCACCTTTCCGACATGGGTCTTTCCGGCAAGGTCGACATTGACTCTATGTTGGAGATTAAAGGCCTTCGAACCGTAAGCTTGGTGAACAATTCCTTCTCAGGTCCTATCCCAGAGTTCAACAGAATCGGCGCTCTCAAGGCTTTGTACATGTCCACCAACCAATTTTCCGGGGAGATTTCCTCGGATTTCTTCTCCTCTTTGAACTCGTTGAAGAAAATCTGGCTTAATGGGAACAAATTCTCGGGAACCATCCCCGATTCCATATCCCAGCTGGACAATCTCATAGAGATTCACCTCGAGAACAATGAATTCTCCGGACCCATCCCGCATTTAAAGCAGAGCATCAAATCGCTGGACATGTCCAACAACAAACTTGAAGGTCCAATCCCAGATAGCTTAACAAAATTTGGGGCTAATTCCTTCCGGGGAAACGAGGGGCTATGCGGGAAACCTCTAGACAAGGCATGCGCCCAGAATGTTACTGAAAGTAAGAATTCTTCCGGCAACGTCATGTTGATCATTCTCTTCATCGTCTGCTTGATCATCGCGGTCGCGCTGTTCATTGCTGTTAAGTCAAGGCGCCGTCTAGACGGCGACTTCAGCGTGCTGAACAGAGACAGCGTGGACGAGGTGCAACTGAACGTGCCGAGCTCATCCGAAAGCAGAGATTCGGAATCGAGCCGGAGAGGGACGGGTTCGAAGAGGGGTGCGGCGAAGAGCGGGAGTACGGATCTGGTGGTGGTGAATGAGGAGAAGGGCGTGTTTGGGTTGCCGGATTTGATGAAGGCGGCCGCGGAGGTTCTCGGAAACGGAGGTTTGGGATCGGCATATAAGGCAGGTATGACGACTGGATTGAGCGTGGTGGTGAAGAGGGTGAGAGCGATCAATCAGATAGGCAGAGATTATTTCGACGCCGAGATGAGAGGCTTTGGGAGAATCAAACATGCCAACATCTTGACCATTCTGGCTTACCATTTTCGCAAGGAAGAGAAGCTCATAATCTCAGAATACATGCCCAAAGGCAGCTTGTTATATGTTTTGCATGGTGATCGGGGAACATCTCATGCAGATCTGACCTGGCCCGTGCGTTTGAAGATAATCAAGGGAATTGCACAGGGGCTTCGATTCCTTCATTCTCATTTCTCTTCCTACAATCTTCCCCACGGGAACTTGAAATCCAGCAATGTCCTCCTAAGACAAGATTACGAGCCTCTCCTCTCTGATTACGCCTTACATCCGCTTCTCAACGCCAATTCTTTCAACGCATTGTTCGCCTTCAAATCCCCAGATTACGTGCACTACCAGGTAATTTCCCAGAAAACCGACGTCTACTGCCTCGGAATCATCATCCTGGAGATCATCACCGGCAAATTCCCTTCTCAGTATCATAGCAACGGCAAGGGCGGCACTGATGTGGTGCAATGGGTGCTCGCTGCGATTTCTGAGAGAAGGGAAGTCGAAGTGATTGATCCCGAAATAGCAAGCACCACCAGCTCCTTGGACAAAATGCTGCAAATTCTCCAAGTGGGAGCCTCTTGCACCGAAAGTAACCCCGAACAACGAATTACCTTGAGTGAAGCCATTAGGAGGATAGAGGAGGCATCAGAGATCGCGGCCAAGTTGAATCTGCAGCCTCACCCTGAAGGTGGATTTTTCGCCGAGACTTTTCGTGATGGTTCCGTTCAACTTCTCAAGTCTCAGCTCCCACCTGAATATAAAGTTGACCGCCCGGTGTCTACTTGCATATACTTTCTGCTTCCGGCGGGGAGTGTTTCTCGCCTGCATCGTATACCCTGTTCTGAGACCTGGCATCATTACATAGGAGAACCTCTTACGGTAGTGGAAATAAATGATAAAGATGGAAGTGTCAAGTTCACCTGCCTTGGACCTAATCTGGCTGATAATCAGAATCCACAGTACACAGTGCCTCCCAATGTGTGGTTTGGTTCATTCCCAACAAAGGACTTTGATATATCGCCAGATGGGTCTGTGCAAAGAACTCCAACTAGAGATCGTGAGAGCCATTACTCCCTAGTAGGTTGCACTTGTGCCCCTGCCTTTCAGTTCCAAGATTTTGAGCTGGGAAAACGTTCTGACCTCATTTCTGAGTTTCCCCACTTGAAGTCTCTCATCAATGCTCTCACCTATCCTGATTCCTCAGCGAGTCACTGA 2382 0.495 MAAVRPRIFFFFLLLLLLTLPSFSSSSDTDALLKLKQSFTNAASLSSWVPNSPPCRWAGIMCDNNIIIGLHLSDMGLSGKVDIDSMLEIKGLRTVSLVNNSFSGPIPEFNRIGALKALYMSTNQFSGEISSDFFSSLNSLKKIWLNGNKFSGTIPDSISQLDNLIEIHLENNEFSGPIPHLKQSIKSLDMSNNKLEGPIPDSLTKFGANSFRGNEGLCGKPLDKACAQNVTESKNSSGNVMLIILFIVCLIIAVALFIAVKSRRRLDGDFSVLNRDSVDEVQLNVPSSSESRDSESSRRGTGSKRGAAKSGSTDLVVVNEEKGVFGLPDLMKAAAEVLGNGGLGSAYKAGMTTGLSVVVKRVRAINQIGRDYFDAEMRGFGRIKHANILTILAYHFRKEEKLIISEYMPKGSLLYVLHGDRGTSHADLTWPVRLKIIKGIAQGLRFLHSHFSSYNLPHGNLKSSNVLLRQDYEPLLSDYALHPLLNANSFNALFAFKSPDYVHYQVISQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVLAAISERREVEVIDPEIASTTSSLDKMLQILQVGASCTESNPEQRITLSEAIRRIEEASEIAAKLNLQPHPEGGFFAETFRDGSVQLLKSQLPPEYKVDRPVSTCIYFLLPAGSVSRLHRIPCSETWHHYIGEPLTVVEINDKDGSVKFTCLGPNLADNQNPQYTVPPNVWFGSFPTKDFDISPDGSVQRTPTRDRESHYSLVGCTCAPAFQFQDFELGKRSDLISEFPHLKSLINALTYPDSSASH 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0503 793 Gene3D Ribonuclease Inhibitor 185 224 IPR032675 -
Lele24g0503 793 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 605 - -
Lele24g0503 793 MobiDBLite consensus disorder prediction 283 312 - -
Lele24g0503 793 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lele24g0503 793 SUPERFAMILY RmlC-like cupins 602 786 IPR011051 -
Lele24g0503 793 Pfam Cupin superfamily (DUF985) 606 764 IPR009327 -
Lele24g0503 793 ProSiteProfiles Protein kinase domain profile. 332 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0503 793 Gene3D Jelly Rolls 603 786 IPR014710 -
Lele24g0503 793 Pfam Leucine Rich Repeat 185 205 IPR001611 GO:0005515
Lele24g0503 793 SUPERFAMILY Protein kinase-like (PK-like) 336 601 IPR011009 -
Lele24g0503 793 FunFam Nuclear pore complex protein NUP107 25 180 - -
Lele24g0503 793 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Lele24g0503 793 Gene3D Transferase(Phosphotransferase) domain 1 410 602 - -
Lele24g0503 793 SUPERFAMILY L domain-like 26 206 - -
Lele24g0503 793 Pfam Protein kinase domain 336 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0503 793 Coils Coil 594 614 - -
Lele24g0503 793 CDD cupin_YML079wp 604 780 IPR009327 -
Lele24g0503 793 Gene3D Phosphorylase Kinase; domain 1 303 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0503 Lele-ChrLele24 3260557 3267480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0503 1 605 Receptor kinase-like Gene Family AT3G42880 47.418 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele24g0503 Pkinase 8.6e-27 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0503 24 3260557 3267480 Lele24g0503 24 3260557 3267480 ECH
Lele21g0500 21 3274532 3275978 Lele24g0503 24 3260557 3267480 hybridization
Lele22g0515 22 3275024 3276484 Lele24g0503 24 3260557 3267480 hybridization