Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0468 ATGGAGAGAAACAGTTTGAACACCAGCTTTAAAGATGGCACTTTCACCAGCAACATCAACAAGAACCAAGTAATGAAAGAATATTGGGACTGCAAATCTCAGATCGGCTGTGGAGTAGATGATTATATAAATGGATTCTCGTGGCCTCCAAGATCATACACTTGTAGCTTCTGCAAGAGGGAATTCAGATCTGCTCAAGCCCTTGGTGGCCATATGAATGTTCATAGGAGGGACAGAGCCAGGCTCAGGCAGCAGTCACCTCCCACCACTACAACCCATGACAGTCGCTCCCCCATGCTCAACCTAAACCTTAACCCTACCTCTGGTGGTCCTGGGTTTTCAACTTCAACTTTGTCCTTGTTACCATCATCATCTTCTTCTACAATGCTCAAAAAACAATTCTCTGCTAGCACTTTGCCCTCCTTCGTTTCTCCTCTACTTCCTTCTTCATCTTCTCCTCTCCCAGCTGCATCTACATCTCCTTCTTATGATCTGAAAAAATGGGCTATGGACGGTATCATGTTGAACCCTCCAAGCACCAAGGCCTCAGAATCTACAAAGATGAAGAATATTGCAAATTCTTTATCAGGGTTTGGAGACTGTAATGACCCTTTTGCGCAAGAAGTTGGTGGTAAAGTGGTAAAAAAGTCTGAGATCATTAGGTTGGACTTGCATATAGGTTTACTTAGCGATCATTCCAAGGATGATTTAGATCTGGAGCTTCGATTGGGTACTTACCCTTAG 744 0.4382 MERNSLNTSFKDGTFTSNINKNQVMKEYWDCKSQIGCGVDDYINGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQQSPPTTTTHDSRSPMLNLNLNPTSGGPGFSTSTLSLLPSSSSSTMLKKQFSASTLPSFVSPLLPSSSSPLPAASTSPSYDLKKWAMDGIMLNPPSTKASESTKMKNIANSLSGFGDCNDPFAQEVGGKVVKKSEIIRLDLHIGLLSDHSKDDLDLELRLGTYP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0468 247 Pfam C2H2-type zinc finger 53 77 - -
Lele24g0468 247 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Lele24g0468 247 MobiDBLite consensus disorder prediction 84 108 - -
Lele24g0468 247 SMART c2h2final6 53 75 IPR013087 -
Lele24g0468 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Lele24g0468 247 PANTHER OS07G0101800 PROTEIN 25 245 - -
Lele24g0468 247 Gene3D Classic Zinc Finger 49 101 - -
Lele24g0468 247 SUPERFAMILY beta-beta-alpha zinc fingers 50 79 IPR036236 -
Lele24g0468 247 MobiDBLite consensus disorder prediction 73 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0468 Lele-ChrLele24 2990722 2991465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0468 29 244 C2H2 Transcription Factor Family AT3G23130 39.908 6.55e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele24g0468 zf-C2H2_6 4.7e-07 CL0361