Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0460 ATGGACTCCTCTTTCTCCATCTTCCACTCTCCCCCCTCCGACTTCTCCTCCGATTCCTCCTTTGCCTCCTCCGATTCCTTCTTCTCCTCCAACTTCCCTAACTCTTACCTCCCCTTCAACGAGAATGACCCCGACGAGATGCTTCTCTACGGCATGATTTCCGAGGCCAACCACAATGATGCCCGCGATGAATCTTTCAATTCTGTCAAGGAGGAGGAGGTCAGCTCCAACGGTACTGCTTTCGGCGCTCCCGCCACCCCCAAGGAGAAGAGCTACAGAGGCGTGCGGCGGCGCCCCTGGGGGAAATTTGCTGCGGAGATAAGGGATTCCACCAGGCACGGCATAAGGGTGTGGCTGGGGACCTTCGATAGTGCAGAGGCGGCGGCTTTAGCTTACGATCAAGCCGCGTTTTCCATGAGGGGATCGGCGGCGATACTGAACTTCCCGGTGGAGAGGGTGAGGGAGTCTCTGAAAGATATGAACTGCGGATCGGAAGAAGGGTGCTCGCCGGTGGTGGCTCTGAAGAGAAAGCACTCGTTGAGAAGAAAAGTGAATAGTAACAAGAGGAAGAACAAGGCGGACGGCAGCGATATGAGAATAGACAATGTGGTGGTGCTGGAAGATCTCGGCTCAGATTACTTGGAACAACTCCTGATGTCCTCGGAGAATCCTAGGCCTTCAGACTCTCATTGCCTCAATGTTCATTAA 708 0.5424 MDSSFSIFHSPPSDFSSDSSFASSDSFFSSNFPNSYLPFNENDPDEMLLYGMISEANHNDARDESFNSVKEEEVSSNGTAFGAPATPKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVERVRESLKDMNCGSEEGCSPVVALKRKHSLRRKVNSNKRKNKADGSDMRIDNVVVLEDLGSDYLEQLLMSSENPRPSDSHCLNVH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0460 235 Pfam AP2 domain 91 141 IPR001471 GO:0003700|GO:0006355
Lele24g0460 235 MobiDBLite consensus disorder prediction 1 24 - -
Lele24g0460 235 SUPERFAMILY DNA-binding domain 91 151 IPR016177 GO:0003677
Lele24g0460 235 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Lele24g0460 235 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Lele24g0460 235 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
Lele24g0460 235 FunFam Ethylene-responsive transcription factor 2 90 151 - -
Lele24g0460 235 MobiDBLite consensus disorder prediction 70 93 - -
Lele24g0460 235 PANTHER DNA-BINDING DOMAIN 57 220 IPR044808 GO:0003700|GO:0009873
Lele24g0460 235 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
Lele24g0460 235 Gene3D AP2/ERF domain 90 151 IPR036955 GO:0003700|GO:0006355
Lele24g0460 235 CDD AP2 90 150 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0460 Lele-ChrLele24 2927565 2928272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0460 37 223 AP2-EREBP Transcription Factor Family AT3G23240 61.702 2.74e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele24g0460 AP2 8.8e-15 CL0081