Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0454 ATGGAAAAGAAGTCCAATCCAATCCAATCCCTGGGAATGGACCGTGGGGTTCTTGATTCTGTGATCAACAGGCTACTTGAAGTTAGAGGGAGACCTGGGAAGCTGGTGAATCTCGCGGAAACAGAAATCAGGCAGCTCTGTTTTGTCTCCAGGGATATCTTCTTGAGGCAGCCCAATCTGTTGGAACTTGAAGCTCCAATTAAGATCTGTGGAGACACTCATGGTCAATATCCTGACCTGCTGAGACTTCTTGATTATGGTGGATTACCCCCTCGCTCCAATTACTTGTTCTTGGGGGATTACGTGGATCGTGGCAAGCAAAGTCTGGAGACAATTTGTCTTCTTCTTGCCTATAAAATAAAGTACCCAGATAACTTTTTCCTTCTGAGGGGCAACCATGAATGTGCTTCTATCAACCGTATCTATGGATTCTACGATGAATGTAAGCAAAGATACAACGTCAGGCTATGGAAAATATTCACAGATTGTTTCAACTGCTTGCCCGTGGCAGCTCTTATCGACGAAAAAATACTATGCATGCATGGTGGACTCTCCCCTGAGTTGTACAACTTCAACCAGATTAGGACTTTACCTCGTCCTTGTGAAGTACCTGAATCTGGTCTGCTATGTGACCTCCTCTGGTCTGATCCTTCTAAACATATTTACGGTTGGGGACCGAACGAACGCGGCGTTTCGTATACTTTCGGGGCTGATAGGGTGACAGAATTTCTTCGAAAGAACGATCTGGACTTAATCTGTAGAGCTCACCAGGTTGTGGAAGATGGATATGAGTTCTTTGCTAATAGACAACTTGTGACTGTGTTCTCAGCACCAAATTATTGTGGAGAGTTTGACAATGCTGGTGCCATGATGACTGTTGATGAGACGCTTATGTGCTCTTTCCAAATTTTAAGGCCTACGGAGAAAAAACCAAGGTTTGGCTTTGGAAGCACAGCCACGATCAAGCCTAGTACTCCAACTAAAATAAAGGCATTTCTTGGGGTGTAG 1008 0.4454 MEKKSNPIQSLGMDRGVLDSVINRLLEVRGRPGKLVNLAETEIRQLCFVSRDIFLRQPNLLELEAPIKICGDTHGQYPDLLRLLDYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPDNFFLLRGNHECASINRIYGFYDECKQRYNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELYNFNQIRTLPRPCEVPESGLLCDLLWSDPSKHIYGWGPNERGVSYTFGADRVTEFLRKNDLDLICRAHQVVEDGYEFFANRQLVTVFSAPNYCGEFDNAGAMMTVDETLMCSFQILRPTEKKPRFGFGSTATIKPSTPTKIKAFLGV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0454 335 SUPERFAMILY Metallo-dependent phosphatases 30 310 IPR029052 -
Lele24g0454 335 Pfam Serine-threonine protein phosphatase N-terminal domain 18 64 IPR031675 -
Lele24g0454 335 Gene3D - 11 317 IPR029052 -
Lele24g0454 335 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 21 309 - -
Lele24g0454 335 ProSitePatterns Serine/threonine specific protein phosphatases signature. 129 134 IPR006186 GO:0016787
Lele24g0454 335 FunFam Serine/threonine-protein phosphatase 11 314 - -
Lele24g0454 335 Pfam Calcineurin-like phosphoesterase 66 258 IPR004843 GO:0016787
Lele24g0454 335 PRINTS Serine/threonine phosphatase family signature 191 218 IPR006186 GO:0016787
Lele24g0454 335 PRINTS Serine/threonine phosphatase family signature 95 122 IPR006186 GO:0016787
Lele24g0454 335 PRINTS Serine/threonine phosphatase family signature 128 152 IPR006186 GO:0016787
Lele24g0454 335 PRINTS Serine/threonine phosphatase family signature 162 188 IPR006186 GO:0016787
Lele24g0454 335 PRINTS Serine/threonine phosphatase family signature 248 268 IPR006186 GO:0016787
Lele24g0454 335 PRINTS Serine/threonine phosphatase family signature 66 93 IPR006186 GO:0016787
Lele24g0454 335 PRINTS Serine/threonine phosphatase family signature 270 286 IPR006186 GO:0016787
Lele24g0454 335 SMART pp2a_7 38 308 IPR006186 GO:0016787
Lele24g0454 335 CDD MPP_PP1_PPKL 17 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0454 Lele-ChrLele24 2879622 2881391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0454 32 251 Calmodulin-binding Proteins AT5G63870 32.061 1.21e-28 110