Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0448 ATGGTGAGAGCTCCTTGCTGTGAGAAGATGGGACTGAAGAAAGGTCCTTGGACTCCCGAGGAAGACCAACTTTTGATCTCCTACATTAAAAAACATGGCCATGGGAATTGGCGAGCCCTCCCAAAGCAAGCTGGTCTTCTGAGATGTGGGAAGAGTTGCAGACTACGCTGGATCAACTACTTAAGGCCAGATATAAAGAGAGGAAATTTCACTCCAGAAGAAGAAGAAATCACCATTAAGCTGCATGAGATGCTTGGCAACAGGTGGTCAGCAATTGCAGCAAATTTACCAGGAAGAACAGACAACGAGATAAAAAATGTGTGGCATACCCACTTGAAGAAGAGGCTTCAAAAAACAACCATTATTAATTCAGATTCCAAAACCAGATCATCTGCAGGCTCCAAACCTTCAATCAAACGTTCCTTTTCCAATTCCAGCACGGTGACAAATCAATCATCAGAACCTGCGATGAGTTTCATCGGTTTCCCAGAACAGGACACGACAACATCATCGTCAGTTTCAGCATCGGGCACTACTACAACTTCTTCTATTGATTGTGGGCAGAGCATGAATGTGGCCATCAAGTGTGAAGACATAGATTCATCTGTGGAGCCTTATTTGTTGCCTCAGATTGATGAAAGCTTTTGGTCAGAAGCAGCAATGGATGCTAATAGTGCCACCATTGAAAATGAATTACCAGTTCAACAATACCCATTTGATTCTGTAGAATCATCGTCCCAACAAGGTTATTATGGGTATAATAATAGTTCGAACTTTGACGATGGAATGGATTTCTGGTACGACGTATTCATCAGAACAGGGGATTTTACAGAGTTGACGTTCTGA 846 0.4267 MVRAPCCEKMGLKKGPWTPEEDQLLISYIKKHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTPEEEEITIKLHEMLGNRWSAIAANLPGRTDNEIKNVWHTHLKKRLQKTTIINSDSKTRSSAGSKPSIKRSFSNSSTVTNQSSEPAMSFIGFPEQDTTTSSSVSASGTTTTSSIDCGQSMNVAIKCEDIDSSVEPYLLPQIDESFWSEAAMDANSATIENELPVQQYPFDSVESSSQQGYYGYNNSSNFDDGMDFWYDVFIRTGDFTELTF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0448 281 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele24g0448 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele24g0448 281 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele24g0448 281 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele24g0448 281 Gene3D - 68 141 - -
Lele24g0448 281 FunFam MYB-related transcription factor 13 66 - -
Lele24g0448 281 SMART sant 66 114 IPR001005 -
Lele24g0448 281 SMART sant 13 63 IPR001005 -
Lele24g0448 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 227 - -
Lele24g0448 281 MobiDBLite consensus disorder prediction 119 182 - -
Lele24g0448 281 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele24g0448 281 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Lele24g0448 281 Gene3D - 13 66 - -
Lele24g0448 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele24g0448 281 CDD SANT 16 61 IPR001005 -
Lele24g0448 281 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0448 Lele-ChrLele24 2825394 2826874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0448 1 279 MYB Transcription Factor Family AT2G31180 49.645 1.42e-82 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele24g0448 Myb_DNA-binding 2.2e-16 CL0123