Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0433 ATGGATCACGTTATTGGCGGAAAATTCAAGCTCGGGCGGAAGATTGGGAGTGGGTCGTTTGGCGAGCTTTATCTGGGCGTTAATGTGCAGAATGGAGAGGAAGTAGGTGTAAAGCTGGAACCTGTGAAGACCAAGCATCCTCAACTTCATTATGAGTCAAAACTATATATGCTTCTCCAAGGAGGAACTGGTATACCCCACTTAAAATGGTTTGGAGTTGAGGGCGATTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTTTAGAAGACTTGTTTAACTATTGCAATAGAAAATTCTCTCTAAAAACAGTTCTGATGCTAGCAGATCAGCTAATAAACAGAGTTGAATACATGCATTCCCGAGGTTTTCTTCACCGTGATATAAAGCCTGATAACTTTTTAATGGGTCTAGGCCGCAAAGCAAACCAGGTGTACATAATTGACTATGGCCTTGCGAAAAAGTATCGGGATCTCCAAACACATAAGCACATACCATACAGGGAAAACAAGAATCTAACTGGAACTGCTCGGTATGCAAGTGTTAACACCCACCTTGGCGTTGAACAAAGCAGAAGAGACGATCTAGAATCACTTGGATATGTGCTCATGTACTTCATGAGAGGAAGTCTCCCGTGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAGAAATACGACAAGATCAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCCTTTGCAAGTCATATCCTTCAGAGTTTACATCTTACTTTCACTACTGCCGATCATTGCGGTTTGATGACAAACCTGATTATGCATACCTAAAGAGACTCTTCCGCGACCTATTTATTAGAGAAGGTTATCAGTTTGATTATGTATTTGATTGGACTATATTAAAATATCCACAAATTGGATCAAGTTCCAGATCACGGCAGCCAAGTGGGAAGCAAGTTATAAACCAAGGACCATCTGCAGAGAGAGTAGAAAGGCCTTTAGTTGCACAAGAGCCTAGGGAACGACTTCCAGGTTCAGTTGAAGCATTTGCTAGAAGAAGTGGCTCTGGTCTGCTTAATGATCATTCTAGGCACAGGTCTTCAGATGGTGTGCCCTCGTCCAAAGTAGTGCATCCTGATTCTGAGAGGACTCGTAGTTCTTCACGCACGGGTAGTGCCTCGATAAGGCCTGTTGTATCAAGCAGCCGGCCAAGCTCCTCTGGTGAGCCTAATGATAGCCGTGCTAGCAGATTAATGTCGAGCAGTGGCCGTCTATCAACCACTCAAAGGATTCAGCCTGGTTTTGAGTCCAAATCATCATCATTTACCCGTGCTACAACATCAAGAGGTGGCCGTGATGATGCAATAAGGACCTTTGAGCTTCTGTCAATTGGCACAGGGAAAAGGAAATGA 1389 0.4363 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQNGEEVGVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFMRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRSRQPSGKQVINQGPSAERVERPLVAQEPRERLPGSVEAFARRSGSGLLNDHSRHRSSDGVPSSKVVHPDSERTRSSSRTGSASIRPVVSSSRPSSSGEPNDSRASRLMSSSGRLSTTQRIQPGFESKSSSFTRATTSRGGRDDAIRTFELLSIGTGKRK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0433 462 Gene3D Transferase(Phosphotransferase) domain 1 1 333 - -
Lele24g0433 462 MobiDBLite consensus disorder prediction 299 446 - -
Lele24g0433 462 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Lele24g0433 462 FunFam Casein kinase 1-like protein 1 329 - -
Lele24g0433 462 MobiDBLite consensus disorder prediction 299 315 - -
Lele24g0433 462 MobiDBLite consensus disorder prediction 378 440 - -
Lele24g0433 462 PANTHER CASEIN KINASE-RELATED 9 356 - -
Lele24g0433 462 MobiDBLite consensus disorder prediction 350 377 - -
Lele24g0433 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lele24g0433 462 FunFam Putative Casein kinase I 1 85 - -
Lele24g0433 462 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0433 462 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0433 462 SMART serkin_6 9 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0433 462 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0433 Lele-ChrLele24 2744766 2748894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0433 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 1.46e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele24g0433 Pkinase 3.8e-25 CL0016