Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0396 ATGTTGCAGGATGCTATCCACGCGCCACCTCCACCCCAGGCGGAGCAACTTACCAATATTGTGTTCAATTCATTATTATCTCATGATCTTCGCTACATTCCATTCCCATGCACGCAAAAATGGGATATATTTCCATATATTGAACAAAAATTGAAATGCCTTGAGATTTTGGAAGCCATGTTGTTCACAATGCTTTTATATCACCTGGTGCAGGATGAAATCTCAAGCCCCATTAGTCCTCGACTTTTCGAGCTTTGTGAAGCTGAATTGTTCCCAGAGGCTCTGCAGAATCATGAGGTTACCTCCAGCTCAAACTGCTGCTATGAGGAGAATTCCTCCTATGCCCCAAATATATCTCTAGCTTTAGATGTAGACAACAATAAATTCAACAATAGCAATACAATCACTACCCAAACTAGCACAAATCCGACCAGCACCGCCCCTGCTGCCCCTACTGCCACCACTACCGCCAACAACAATACAACCAATAGTACCAATCTGTCCATTATCTTTGACTCACAAGATGAAATTGACAATGACATTTCTGCCTCCATAGACTTCTCATCATCTCCTTCTTTTCCTGTCCCTCCATATCTCCCAGTCAAAAATCAACAGGATCAGCAATTTGATTTCTCTTCACTGCAGTCTCAGGTCACTACACTAGCAGCGAGTTCAGCTGTGGATGGCCTTGCACAATACTCCATTGACTCTGCAGTCGCACCTCTTATGGGGGCTCCATTAGCTTCTGTTTTTGAAGACGATTGCTTATCTTCTGTCCCTTCTTATGTGCCTTTGAACCCTTCATCTCTTTCTTGCTCTTATCTTAAGCCTGCTGGCATAGGATCTTACATGCCTCTTGGTCCCCTTAATACTGCCTTATCTGCTGATAGTTCTGGGATATTTGGTGGCAGCATTCTTCTGGGTTCTGAACTGCAGGCACAAGAACTGGATTACCAGGGAGATAATGGTGGATTTTATTGTCCAGATTCAATTCAAAGGGTTTTCAACCCTCCAGACCTCCAGGCACTTAGTGCCGAGAGCCAGCAACTTGTCGCTGGGGCTGGGAGTTCCACCACTTTGACACCGGAAATATCAAACTTGGAGGATTCTACCTTCAAGGTTGGAAAGCTTTCTGTTGAACAGAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGGAATGAGAGAAACTTCAGCAAGAAAATCAAGTATGCTTGTCGCAAAACTCTAGCCGATAGCCGGCCTCGGGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGATACTCAAAGACCTGCTAGTAGCAATCATGAAGAAGATGATGAAGAAGACGTAGTTGTGAAGGAAGAAGATGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1443 0.4359 MLQDAIHAPPPPQAEQLTNIVFNSLLSHDLRYIPFPCTQKWDIFPYIEQKLKCLEILEAMLFTMLLYHLVQDEISSPISPRLFELCEAELFPEALQNHEVTSSSNCCYEENSSYAPNISLALDVDNNKFNNSNTITTQTSTNPTSTAPAAPTATTTANNNTTNSTNLSIIFDSQDEIDNDISASIDFSSSPSFPVPPYLPVKNQQDQQFDFSSLQSQVTTLAASSAVDGLAQYSIDSAVAPLMGAPLASVFEDDCLSSVPSYVPLNPSSLSCSYLKPAGIGSYMPLGPLNTALSADSSGIFGGSILLGSELQAQELDYQGDNGGFYCPDSIQRVFNPPDLQALSAESQQLVAGAGSSTTLTPEISNLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTQRPASSNHEEDDEEDVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0396 480 MobiDBLite consensus disorder prediction 417 446 - -
Lele24g0396 480 Pfam CCT motif 382 424 IPR010402 GO:0005515
Lele24g0396 480 MobiDBLite consensus disorder prediction 133 163 - -
Lele24g0396 480 MobiDBLite consensus disorder prediction 417 439 - -
Lele24g0396 480 ProSiteProfiles CCT domain profile. 382 424 IPR010402 GO:0005515
Lele24g0396 480 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 140 441 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0396 Lele-ChrLele24 2548229 2552100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0396 362 426 C2C2-CO-like Transcription Factor Family AT5G24930 41.538 8.56e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele24g0396 CCT 6.6e-19 CL0281