Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0390 ATGGCAGCTTCTGCAGCTGCGGCTATAGGCTCATCATTCTCTTCCTCCATCAACACTCTCAAGTGCCTTCGTTCATCCAAGAACTTGTCCTCTGAACCCCTCCTCAGAATTTCATCAAACCGCGTGTTGGCGTATGGGTCACTATCGCACTTGTTGGAACCAATTTCCCTTGATACTAATGTCAACAAGTTGTGGGTTTCAAGGGTTTCAGCACAAGAAGAGCTTGTAGTGTTCGATGATATTGATGCTGGTTTAGTTGAGGAGAATGAGGAGGGAGAAAAGGAAGCGGTAGAAGAAGAAGAGGCTGAAGAAGTCTCTGTCAGCACTAAGCTTTATTTTGGGAACTTGCCTTACAGTGTTGATAGTGCACAACTTGCAGCGATTATTCAGGATTATGCCAGCCCAGAACTCATTGAGGTTCTTTACCACAGAGAGACTGGAAAAAGCAGAGGTTTTGCATTTGTTACAATGAGTAGTGTCGAAGATTGCAATGCAGTGATAGAAAACCTTGATGGAACTGAATACTTGGGTAGAACCCTGCGAGTGAACTTCTCTGACAAACCTAAACCGAAAGAACCGTTGTACCCTGAAACTGAACATAAGCTTTTTGTTGGGAACTTGTCATGGTCTGTAACTTCTGAGAGTCTGACAGAAGCTTTTCAAGAATATGGACATGTGGTTGGATCTAGGGTGTTATATGATGGGGAAACAGGAAGATCCCGTGGTTATGGCTTTGTTTGCTATTCAACCAAATCAGAAATGGAAGCTGCCCTTTCATCCATGAATGGAGTGGAACTTGAAGGACGGGCAATGCGTGTAAGCTTGGCTGAAGGGAAACGATCATAA 846 0.4409 MAASAAAAIGSSFSSSINTLKCLRSSKNLSSEPLLRISSNRVLAYGSLSHLLEPISLDTNVNKLWVSRVSAQEELVVFDDIDAGLVEENEEGEKEAVEEEEAEEVSVSTKLYFGNLPYSVDSAQLAAIIQDYASPELIEVLYHRETGKSRGFAFVTMSSVEDCNAVIENLDGTEYLGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLTEAFQEYGHVVGSRVLYDGETGRSRGYGFVCYSTKSEMEAALSSMNGVELEGRAMRVSLAEGKRS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0390 281 Gene3D - 190 281 IPR012677 -
Lele24g0390 281 PANTHER OS02G0815200 PROTEIN 48 279 - -
Lele24g0390 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 109 187 IPR000504 GO:0003723
Lele24g0390 281 SMART rrm1_1 110 183 IPR000504 GO:0003723
Lele24g0390 281 SMART rrm1_1 201 274 IPR000504 GO:0003723
Lele24g0390 281 FunFam 31 kDa ribonucleoprotein, chloroplastic 71 190 - -
Lele24g0390 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 200 278 IPR000504 GO:0003723
Lele24g0390 281 Gene3D - 79 189 IPR012677 -
Lele24g0390 281 SUPERFAMILY RNA-binding domain, RBD 105 192 IPR035979 GO:0003676
Lele24g0390 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 111 181 IPR000504 GO:0003723
Lele24g0390 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 202 271 IPR000504 GO:0003723
Lele24g0390 281 SUPERFAMILY RNA-binding domain, RBD 195 280 IPR035979 GO:0003676
Lele24g0390 281 FunFam 28 kDa ribonucleoprotein, chloroplastic 191 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0390 Lele-ChrLele24 2506406 2508544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0390 108 279 Eukaryotic Initiation Factors Gene Family AT3G16380 31.016 3.72e-17 79.3