Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0375 ATGCCCAGCGGCAGCACCACCAACCCCATCAATGTTGGTGCCGGTGCGACCACCCCCACCATTCTTTTGGTCCCGAAATTGGAACCGAAGCTCGAGCCGTTGGACGAGCCGTGTCTGAACCATCGTCCCCAAGAACCCCAAGAAGTGGAGCAGACTATGTTTTCGAATCATGCCTTGGACGGGCTCTCTCCGTCACAGCACAATAATTTCTGTGATAATAGTCTGGTTTCCGTGCAATCCCGAGGCGCATTGACGGAAGAAAACAACTTGTATGCCGAGTTCTATCGATTTTCCGAGCAGTTTAGGACTCTCTTAGCTGAGAGGTTAAACGCAATGGGAGATGTCGACATTTTACGTGCAGATTCGCGGGTAATTGTTCCTGTGCCAGAGGAAAACCAGATTCCTCCGGCCGTCGTTACTCCGCGGCGGAGCCCGCGGGTGAAGGAGCTGGTAAGGGTCAGTGATCTTCGAATTGAAGATGACAGGTATTTCCGCGACATTACTAGAAGGACCAGGATGATTTATGATTCGTTGCGTGTTCTGGCAACGGTGGAGGATGAGAAGAAATTCGAACTTGCTAGCGCTAAACGAATGCGAGGTGATTTGAGGGCTGCCTCGTTGATGAGGGATCGTGGATTGTGGCTTAATCGTGATAAGCGGATAGTGGGTGCGATTCCAGGGATTTACATTGGCGATTTGTTCTTTTTTAGGATGGAAATCGTTGTGGTTGGGTTGCACGGTCAACCACAAGCTGGAATAGACTATCTTCCTTCTAGCCAGAGCACAAATGGGGAGCCGATAGCAACCAGTGTGATAGTTTCTGGTGGATACGAGGACGATGAGGACAGTGGCGATGTGATAATCTACACGGGTCATGGAGGCCAAGATAAGAATCATTCCAGGCAAGTTGTTCACCAGAAGTTAGAAGGAGGAAATCGTGCTATGGAAAGAAGCATGCATTATGGGATTGAAGTGCGCGTTATTCGAGGGTTCAAATATGAGGGAAGTGTTTCTAGTTGGGGAGTGAGGTCATTGGACATTATTCATGCCGGTGCTTTTATCTGTGAATATGCTGGGGTCGTTCTGACTATGGAGCAAGCACAAATTTTGTCAATGAATGGTGATTCATTGATATATCCGAGTCGGTTTTCTAATAGCCAAGCCTCAGAATGGGGTGATTTATCTCAAATTTACTCTGATTATGTGCGTCCATCTTATCCCTCAATTCCCCCTTTAGATTTTGCTATGGATGTGTCCACAATGAGGAATGTTGCTTGTTATATGAGCCACAGTTCAATTCCTAATGTGTGGGTTCAGTTTGTGCTGTATGATCACAATAATCTGATGTTCCCTCACCTTATGCTATTTGCATTGGAGAACATCCCTCCAATGAGGGAGCTCAGCCTTGATTATGGTGTGTCTGATGAATGGACAGGAAAGCTTTCTGTATGTAACTGA 1458 0.4705 MPSGSTTNPINVGAGATTPTILLVPKLEPKLEPLDEPCLNHRPQEPQEVEQTMFSNHALDGLSPSQHNNFCDNSLVSVQSRGALTEENNLYAEFYRFSEQFRTLLAERLNAMGDVDILRADSRVIVPVPEENQIPPAVVTPRRSPRVKELVRVSDLRIEDDRYFRDITRRTRMIYDSLRVLATVEDEKKFELASAKRMRGDLRAASLMRDRGLWLNRDKRIVGAIPGIYIGDLFFFRMEIVVVGLHGQPQAGIDYLPSSQSTNGEPIATSVIVSGGYEDDEDSGDVIIYTGHGGQDKNHSRQVVHQKLEGGNRAMERSMHYGIEVRVIRGFKYEGSVSSWGVRSLDIIHAGAFICEYAGVVLTMEQAQILSMNGDSLIYPSRFSNSQASEWGDLSQIYSDYVRPSYPSIPPLDFAMDVSTMRNVACYMSHSSIPNVWVQFVLYDHNNLMFPHLMLFALENIPPMRELSLDYGVSDEWTGKLSVCN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0375 485 SUPERFAMILY SET domain 312 482 IPR046341 -
Lele24g0375 485 SMART set_7 325 478 IPR001214 GO:0005515
Lele24g0375 485 ProSiteProfiles YDG domain profile. 223 385 IPR003105 -
Lele24g0375 485 SMART G9a_1 218 368 IPR003105 -
Lele24g0375 485 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 133 335 - -
Lele24g0375 485 Pfam SAD/SRA domain 222 341 IPR003105 -
Lele24g0375 485 Gene3D - 204 344 IPR036987 -
Lele24g0375 485 ProSiteProfiles PUA domain profile. 314 332 - -
Lele24g0375 485 Pfam SET domain 340 472 IPR001214 GO:0005515
Lele24g0375 485 ProSiteProfiles SET domain profile. 321 472 IPR001214 GO:0005515
Lele24g0375 485 SUPERFAMILY PUA domain-like 204 342 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0375 Lele-ChrLele24 2433120 2435126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0375 322 474 Su(var)3-9 homologs AT5G04940 31.138 1.73e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele24g0375 SET 5.2e-11 No_clan