Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele24g0360 | ATGTTCATGAGTACCCCCGAATTAGTATATGCCAAAAAAGTTAAAGAAACCAAAAGGCTTGCATCAACGGTCAGTAACATGGCAGTGGCAACATATAGCGAAGGTTTTTGTAAAAGTGCTATGGTCATCAGGATACTGATCTCATGTATAGACTCAGTTTCTTATATTGTTACTTCAATCAATTTCAGAGTTGGAACTCAAGTTTTTGTTGAGGACCCTGAGGTAGCTTGGATAGATGGAGAAGTTGTGGAAACTAATGGCGAAGAGATCAAAGTTAAATGCGCATCAGAGAAGACGGTTGTGGTCAAAGCATCCAATGTCCATCCCAAGGATCCTGAGTTCCCTCCTTCTGGTGTGGATGATATGACAAGGCTGGCATATCTGCATGAGCCGGGGGTTCTCCAGAATTTGCAAATTCGATATGATACCAACGAAATATATACATACACAGGAAATATATTGATCGCGGTGAACCCTTTTCAAAGATTACCTCATCTGTATGGCCACGATGTCATGGATAAATATAAAGGATCAGCGATTGGTGAATTGACCCCACATCCTTTTGCAATTGCTGATTCTGCATATAGGATGATGTTACATGAAGGAACAAGCCAATCAATTTTGGTTAGTGGTGAAAGTGGAGCCGGCAAAACAGAGAGCACAAAGATGCTTATGCATTATCTTGCCTTTATGGGTGGTAGAAAGGAATCTGGGGGACGATCTGTGGAGCAGCAAGTTCTAGAGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCAAAGACAGTTAGAAACAATAATTCAAGTCGATTTGGAAAGTTTGTGGAGCTACAGTTTGATCACAGGGGGAGAATTTCAGGAGCTGCTATTAGAACTTATTTGCTGGAACGATCCCGTGTCTGTCAAGTTTCAGACCCTGAGAGAAACTACCATTGTTTTTATATGATTTGTGCTGCACCAGAAGAGGATATTAAAAAGTTTAAATTGGGAAATCCAAGAACTTATCATTACCTAAACCAATCAAATTTCTTCGAATTGGATGGATTGGATGAATCCAAGGAGTACCTTGCAACTAGGAGAGCTATGGAGGTTGTTGGCATCACTTCTGATGAGCAGGATGCTATATTCAGAATAGTAGCTGCAATACTGCACTTAGGAAACATTGAATTTCAGAAGGGTGATGAGCCGGATTCCTCTGAACCCAAGGATGATCAATCTCGTCTCCACCTAAAAACTACAGCTGAACTTTTGATGTGCGACGACAAATCACTTGAGGACTGCTTGTGCAAACGTGTTATGGTAACACGTGGTGAGGCCATAACAAAATGGCTTGATCCAAATTCGGCAGCTCTCAGTAGAGATTCATTGGCCAAAATAGTTTACTCAAAGCTGTTTGACTGGATCGTGAATAGGATTAATAACTCTATTGGTCAAGATCCAAATTCGAAGAACTTAATTGGGGTTCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGCATCAACCTGACAAATGAGAAATTACAGCAACATTTCAACCAGGACGTCCTTGATCTCATCGAGAAGAAACCTGGCGGCATCGTTGCTCTTCTTGATGAGGCCTGCATGTTTCCAAGATCGACACACGAAACATTTGCCGAAAAGTTATATCAGACTTTTAAAGACAATAAACGCTTCAGCAAACCAAAGTTGTCTCGTACTGATTTCACCATCTGCCACTATGCCGGTGATGTCACTTATCAGACTGACTTTTTCCTTGACAAGAACAAAGACTACGTTGTTCCAGAGTTCGAGGCACTACTCAACGCTTCAAAGTGCTCCTTTGTTTCAGCATTGTTTCCACCTCCACCTGAGGAAACTTCCAAATCATCAAAGTTCTCATCAATAGCCACCCAGTTTAAGCAACAACTACAATCTTTGCTTGAAACGCTGAATGCTACTGAGCCACATTACATTCGTTGCATAAAGCCGAATAATCTTCTCAAGCCAAGGATATTTGAGAACACTAATGTGTTGCAGCAGCTTCAATGTGGGGGAGTAATGGAGGCAATTAGGATAAGTTGTGCTGGATACCCAACTAGGAAGCAGTTTGATGAATTTGTGAAGCGGTTTCTAGTTCTGTCACCTGATGCGCTGAAAGGATGCCCTGATGAGAGGACAGCTTGCGTGAAGCTGCTAGGACAAGTAAATCTTGAAGATTATCAGGTGGGCAAGACTAAAGTATTTCTGAGAGCAGGACAGATGGCAAAACTAGATTCATGTCGTGCTGAGGTCTTAGGACGATCTGCAACCATTATTCAGAGATTTTCTAGTCACTGCCGAGGTTATACAGCCTACATCCAACTCCTGAGGCTAAGGGAAGCAGCAATCATTATACAGTGTGCCTCGAGGGGACAAATGGCTCGTAAAGAACTTCGAATACTTCAAATGGCTTCTAGGGAAACTGGTGCTCTCAAAGCTGCCAAAGAAAAACTTGAAAAGGAAGTTGAAGAATTAAATTCTTCTCTACAAATGGAGAAGAAGATGATGGCTGATGCTGAACAGGAAAAAACAAAATTGCAATCTGCCTTGGAAAAGACAAATGAGGAAAATTCAAAATTGCAATCTGCTTTGGAAGAGATTAAGGATGAAAATGCAAAACTGCAAACTTCCTTGGAAGAGACTACGGCATTGCTCTTTCAGGAGCTCCAGGCAGCAAAAAATGCACTGGTTAAGTCACTGGAAAAGAAAGTTGATGACACCGAGAAGAAAACTGTAGAAAGCACTGGTTAA | 2787 | 0.4133 | MFMSTPELVYAKKVKETKRLASTVSNMAVATYSEGFCKSAMVIRILISCIDSVSYIVTSINFRVGTQVFVEDPEVAWIDGEVVETNGEEIKVKCASEKTVVVKASNVHPKDPEFPPSGVDDMTRLAYLHEPGVLQNLQIRYDTNEIYTYTGNILIAVNPFQRLPHLYGHDVMDKYKGSAIGELTPHPFAIADSAYRMMLHEGTSQSILVSGESGAGKTESTKMLMHYLAFMGGRKESGGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDHRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMICAAPEEDIKKFKLGNPRTYHYLNQSNFFELDGLDESKEYLATRRAMEVVGITSDEQDAIFRIVAAILHLGNIEFQKGDEPDSSEPKDDQSRLHLKTTAELLMCDDKSLEDCLCKRVMVTRGEAITKWLDPNSAALSRDSLAKIVYSKLFDWIVNRINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQDVLDLIEKKPGGIVALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTICHYAGDVTYQTDFFLDKNKDYVVPEFEALLNASKCSFVSALFPPPPEETSKSSKFSSIATQFKQQLQSLLETLNATEPHYIRCIKPNNLLKPRIFENTNVLQQLQCGGVMEAIRISCAGYPTRKQFDEFVKRFLVLSPDALKGCPDERTACVKLLGQVNLEDYQVGKTKVFLRAGQMAKLDSCRAEVLGRSATIIQRFSSHCRGYTAYIQLLRLREAAIIIQCASRGQMARKELRILQMASRETGALKAAKEKLEKEVEELNSSLQMEKKMMADAEQEKTKLQSALEKTNEENSKLQSALEEIKDENAKLQTSLEETTALLFQELQAAKNALVKSLEKKVDDTEKKTVESTG | 928 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele24g0360 | 928 | Gene3D | - | 494 | 652 | - | - | |
| Lele24g0360 | 928 | MobiDBLite | consensus disorder prediction | 849 | 873 | - | - | |
| Lele24g0360 | 928 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 90 | 819 | IPR027417 | - | |
| Lele24g0360 | 928 | Gene3D | - | 66 | 110 | IPR008989 | GO:0003774|GO:0005524|GO:0051015 | |
| Lele24g0360 | 928 | FunFam | Myosin 2 | 367 | 484 | - | - | |
| Lele24g0360 | 928 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 367 | 630 | - | - | |
| Lele24g0360 | 928 | SMART | MYSc_2a | 111 | 762 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele24g0360 | 928 | CDD | MYSc_Myo11 | 131 | 749 | IPR036018 | - | |
| Lele24g0360 | 928 | Gene3D | - | 307 | 365 | - | - | |
| Lele24g0360 | 928 | Coils | Coil | 902 | 922 | - | - | |
| Lele24g0360 | 928 | Pfam | IQ calmodulin-binding motif | 791 | 811 | IPR000048 | GO:0005515 | |
| Lele24g0360 | 928 | Coils | Coil | 813 | 896 | - | - | |
| Lele24g0360 | 928 | Pfam | Myosin head (motor domain) | 119 | 522 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele24g0360 | 928 | Pfam | Myosin N-terminal SH3-like domain | 65 | 107 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele24g0360 | 928 | Gene3D | - | 695 | 762 | - | - | |
| Lele24g0360 | 928 | FunFam | Myosin heavy chain | 307 | 362 | - | - | |
| Lele24g0360 | 928 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 63 | 112 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele24g0360 | 928 | SMART | iq_5 | 789 | 811 | IPR000048 | GO:0005515 | |
| Lele24g0360 | 928 | PANTHER | MYOSIN | 109 | 898 | - | - | |
| Lele24g0360 | 928 | ProSiteProfiles | IQ motif profile. | 790 | 819 | IPR000048 | GO:0005515 | |
| Lele24g0360 | 928 | Gene3D | Kinesin motor domain | 120 | 691 | IPR036961 | - | |
| Lele24g0360 | 928 | Gene3D | - | 763 | 818 | - | - | |
| Lele24g0360 | 928 | ProSiteProfiles | Myosin motor domain profile. | 117 | 761 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele24g0360 | 928 | PRINTS | Myosin heavy chain signature | 147 | 166 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele24g0360 | 928 | PRINTS | Myosin heavy chain signature | 484 | 512 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele24g0360 | 928 | PRINTS | Myosin heavy chain signature | 204 | 229 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Lele24g0360 | 928 | PRINTS | Myosin heavy chain signature | 251 | 278 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele24g0360 | Lele-ChrLele24 | 2338618 | 2350680 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele24g0360 | 766 | 922 | Myosins gene family | AT1G04600 | 36.735 | 5.48e-18 | 87.8 |