Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0346 ATGCCACGTTCCTTTGCATCCTTCCCTTCTTCTTCTTCTACGTTTGATGGTCTCTTAAAAATTAAGATGTCTTGGAATTTCAATAAAAGGAGAGCGTTGGAAGACAGGTGTTCTGGTATTCTACTATTATTCACTTTACTTCTTTCTACTACAGAGGGATTGAACACAGAGGGGCAGTACCTGCTCGAGCTGAAGAGTAGTCTTCATGATGAATCTAATCATTTGGCGAATTGGAAATCTACTGATGAAACACCTTGTGGATGGGCGGGTGTGAATTGCACTTATGAATATAATCCAGTGGTGTGGTCACTTGACTTGAGTTCAATGAATCTTTCTGGAACTCTAAATCCTAGCATTGGAGGTCTGACGCATCTAACTTATCTCAATCTTGCCGACAATGGGCTGACTGGAAATATACCCAGTGAAATTGGAAATTGCTCGAGCTTGGAATTTCTTTTTTTGAACAATAATCGATTCAGGGGACAAATTCCTGCTGAATTGGGTAAGCTGTCCCTTCTGAGACGTTTGAATATTTGCAACAACATACTCTCAGGTTCTCTGCCAGAGGAACTGGGAACCTTGTCTTCCCTGGTTGAGCTTGTAGCTTACACAAACAATCTGACTGGTCCCCTGCCTCGTTCTATTGGAAATCTAAAGGGTCTCACTACTTTGAGAGCTGGGGGAAATAGATTGTCTGGTAGCTTGCCAAGTGAGATCGGTGGATGCACGAGCATGGAATTTCTTGGCCTAGCTCAAAATCAGATAGGAGGAGAACTGCCGACAGAGATTGGGATGCTTCAGAACTTGATAGAACTGCTTTTGTGGAACAATCAGTTATCAGGGCTTATTCCTAAAGAGATTGGGAATTGTACCAGCCTTCAAACCCTTGCTTTATATGGAAATGCTCTTGTTGGACCTATACCTGAGGAGATTGGGAATCTCAAATCTCTGGGGAGGTTGTACCTTTACCGAAATAAGTTGAATGGAACCATTCCAAGGACAATTGGGAATCTTTCTCAGGCATTGGAAATTGATTTCTCAGAAAACTCTTTGGTGGGTGATATTCCTTCTGAGATCAGCAAAATAAGTGGTCTCCAACTGCTCTTTCTCTTTGAGAACCAGCTATCGGGTGTTATACCCAGTGAGTTTAGTAGCTTGAGAAACCTGACAAGGCTGGACCTGTCCATTAATAATCTCACAGGTCCAGTTCCATTGGGGTTCCAGTATTTGACTCGAATGGCTCAGTTGCAACTTAATGACAACTCTCTAAGTGGGAATATTCCTCAGAGCCTTGGACTTTATAGTCCTCTTTGGGTGGTTGATTTTTCTAACAATCACTTGGCAGGAACGATACCTCCTCATCTATGTCGAAATTCTAACTTGATGTTGTTGAATCTGGCTTCTAATCGGCTGTATGGAAATATACCAACTGGCATCCTGAACTGTGAGACATTGGCTCTGCTACTATTGGTTGGAAATAGTCTCACTGGTGGCTTTCCTTCACAACTGTGCAAACTAGTGAACCTTACTGCCGTTGAGCTGAGCCAGAACAGGTTCAGTGGTCCTATTTCTCCCGAGATCGAGAGGTGCCAGAAGTTGCAGAGGCTTCATATTGCTAACAACTACTTCACATTAGAGTTGCCTAAAGAAATAGGAAACCTTTCTCAATTAGTGACCTTCAATGTTTCGTCTAATTCTTTCATTGGTCCAATCCCACATGAAATTGTTAGATGCAAGAAGCTCCAGCGACTTGATCTCAGCGGCAACAGCTTTACTGGTTCCCTACCAGATGAGCTTGGAACACTCTCACAGTTGGAGCTTCTCAAGCTCTCAGATAATAAGCTTACAGGGAATATTCCTTCACCATTAGGTAATCTGCTTCGTTTGACTGCATTGCAGATGGGTGGCAATTTATTTTCTGGAGAAATACCTCCGGATCTGGGTAATCTCACAAGCTTACAGATTGCATTGAATCTCAGTTACAACGACCTTTCTGGAAGTGTACCTGATAAACTTGGCAATCTCTATATGCTTGAGTTTCTCCTTCTCAATAATAATAATCTGAGTGGTGAAATTCCCAGCACATTTGAAAACCTTTCAAGTTTGATGGGATGTAATTTCTCATACAATAATCTTTCTGGACCTATACCTTCCATTCCACTATTTGGAAATATGGAAATTAGCAGCTTTGTTGGTAACAATGGCCTCTGTGGTGCTCCTCTGCTTGGCTGCAACACTAATCCATCTTCTCTCTCTGATCCTCCTATGAAAAATCCTAATGCTTCTCGCACCAAGATTATCACTATTATCGCAACGGTTGTTGGTGGCGTTTCTCTCATTCTTATAGTATTCATTTTATATTTAATGAGACGTCCTCCTAAGCCTATTTCTTCATTGAGGGATTCTGAAATTCCCTCCCCAGATTCAGATATCTATTTTCCTCCAAAAGATGGCTTCACCTTCCATGATCTACTTGAAGCTACCAACAGCTTTCATGACAGTTATGTTATTGGAAGAGGGGCTTGCGGAACAGTTTACAAGGCTTTGATGCCATCTGGGAAGACTATAGCTGTTAAAAAGTTAGCATCCAACAGGGAAGGGAACAACATCGAGAACAGCTTCCGGGCTGAGATATTGACTCTTGGAAAGATAAGGCATCGAAACATAGTGAAGTTGTATGGATTTTGCTATCACCAAGGTAGCAATCTCCTACTATATGAGTACATGGCAAGGGGTAGCCTAGGGGAGCAACTTCATGGATTTGCAAGTAATTTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCAGCAGAGGGGCTTGCCTACTTGCATCATGACTGTAAACCAAAGATCATTCACCGTGATATAAAATCAAATAACATTCTACTTGATGAAAACTTTGAGGCCCATGTAGGTGATTTTGGTTTAGCAAAAGTCATTGACATGCCTCAATCGAAGTCAATGTCAGCTGTTGCTGGATCATATGGTTATATTGCTCCTGAATATGCATACACCATGAAGGTCACTGAGAAGTGTGATATCTATAGCTATGGAGTTGTGCTGTTGGAGTTGCTAACAGGAAGAACGCCGGTTCAGCCGCTCGAGCAAGGAGGCGATCTGGTGACATGGGTCAAAAACTATATTCGGAGCCATAACAACACACTGTCCTCGGGTGTGCTTGACAATCGTCTCAATCTCCAAGATCAAACCACTGTGAACCACATGCTCACTGTTCTCAAAATTGCTTTGCTCTGCACAAATATGAACCCTACCGATCGCCCATCAATGCGCCAAGTCGTGTTGATGCTTATAGAATCAAAGGAGCGAGAAGGAAACTTGGCTGTTTCTCCGTCTCGGTATGAGGATCTCACTTCCAAAGAAGATGATGAGCAAAAGAGTACGTGA 3408 0.4252 MPRSFASFPSSSSTFDGLLKIKMSWNFNKRRALEDRCSGILLLFTLLLSTTEGLNTEGQYLLELKSSLHDESNHLANWKSTDETPCGWAGVNCTYEYNPVVWSLDLSSMNLSGTLNPSIGGLTHLTYLNLADNGLTGNIPSEIGNCSSLEFLFLNNNRFRGQIPAELGKLSLLRRLNICNNILSGSLPEELGTLSSLVELVAYTNNLTGPLPRSIGNLKGLTTLRAGGNRLSGSLPSEIGGCTSMEFLGLAQNQIGGELPTEIGMLQNLIELLLWNNQLSGLIPKEIGNCTSLQTLALYGNALVGPIPEEIGNLKSLGRLYLYRNKLNGTIPRTIGNLSQALEIDFSENSLVGDIPSEISKISGLQLLFLFENQLSGVIPSEFSSLRNLTRLDLSINNLTGPVPLGFQYLTRMAQLQLNDNSLSGNIPQSLGLYSPLWVVDFSNNHLAGTIPPHLCRNSNLMLLNLASNRLYGNIPTGILNCETLALLLLVGNSLTGGFPSQLCKLVNLTAVELSQNRFSGPISPEIERCQKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNSFIGPIPHEIVRCKKLQRLDLSGNSFTGSLPDELGTLSQLELLKLSDNKLTGNIPSPLGNLLRLTALQMGGNLFSGEIPPDLGNLTSLQIALNLSYNDLSGSVPDKLGNLYMLEFLLLNNNNLSGEIPSTFENLSSLMGCNFSYNNLSGPIPSIPLFGNMEISSFVGNNGLCGAPLLGCNTNPSSLSDPPMKNPNASRTKIITIIATVVGGVSLILIVFILYLMRRPPKPISSLRDSEIPSPDSDIYFPPKDGFTFHDLLEATNSFHDSYVIGRGACGTVYKALMPSGKTIAVKKLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMARGSLGEQLHGFASNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVKNYIRSHNNTLSSGVLDNRLNLQDQTTVNHMLTVLKIALLCTNMNPTDRPSMRQVVLMLIESKEREGNLAVSPSRYEDLTSKEDDEQKST 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0346 1135 SMART LRR_typ_2 218 242 IPR003591 -
Lele24g0346 1135 SMART LRR_typ_2 266 290 IPR003591 -
Lele24g0346 1135 SMART LRR_typ_2 386 409 IPR003591 -
Lele24g0346 1135 SMART LRR_typ_2 602 626 IPR003591 -
Lele24g0346 1135 SMART LRR_typ_2 122 146 IPR003591 -
Lele24g0346 1135 SMART LRR_typ_2 675 698 IPR003591 -
Lele24g0346 1135 SMART LRR_typ_2 314 338 IPR003591 -
Lele24g0346 1135 SUPERFAMILY RNI-like 343 714 - -
Lele24g0346 1135 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 434 748 - -
Lele24g0346 1135 ProSiteProfiles Protein kinase domain profile. 831 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0346 1135 Gene3D Ribonuclease Inhibitor 206 306 IPR032675 -
Lele24g0346 1135 Gene3D Ribonuclease Inhibitor 307 410 IPR032675 -
Lele24g0346 1135 Gene3D Phosphorylase Kinase; domain 1 805 908 - -
Lele24g0346 1135 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 909 1120 - -
Lele24g0346 1135 SUPERFAMILY L domain-like 56 351 - -
Lele24g0346 1135 Pfam Leucine rich repeat N-terminal domain 55 93 IPR013210 -
Lele24g0346 1135 Gene3D Ribonuclease Inhibitor 53 205 IPR032675 -
Lele24g0346 1135 PANTHER UNNAMED PRODUCT 41 136 - -
Lele24g0346 1135 Pfam Protein kinase domain 832 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0346 1135 Gene3D Transferase(Phosphotransferase) domain 1 909 1124 - -
Lele24g0346 1135 SMART serkin_6 831 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0346 1135 MobiDBLite consensus disorder prediction 1111 1135 - -
Lele24g0346 1135 Gene3D Ribonuclease Inhibitor 411 748 IPR032675 -
Lele24g0346 1135 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 213 305 - -
Lele24g0346 1135 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 797 908 - -
Lele24g0346 1135 SUPERFAMILY Protein kinase-like (PK-like) 806 1104 IPR011009 -
Lele24g0346 1135 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 53 212 - -
Lele24g0346 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 952 964 IPR008271 GO:0004672|GO:0006468
Lele24g0346 1135 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 306 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0346 Lele-ChrLele24 2227424 2232058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0346 76 1109 Receptor kinase-like Gene Family AT1G73080 37.800 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele24g0346 Pkinase 2e-48 CL0016