Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0345 ATGAGTCGTGGCGGTTCATCGTCATCGTCATCGTCAAGATGGTGCCCAACCCAGGAGCAGCTTGTGATTCTTGAGGAGATATACAGAGGTGGGGTCAGGACTCCAAATGCGTCGCAGATTCAGCATATCACGGCTCAACTCTCTTTCTATGGCAAGATAGAGGGCAAGAATGTCTTCTATTGGTTTCAGAACCACAAGGCTCGGGACCGCCAGAAACTCCGCCGCAGATTGAACAAGCAACTTCAGTTACAGCAGCAGCAGCAGCAACACCACCTCTGTAACGATTATTACCTTCACCTTCATCTGAATCACAACTATAACAGTCACCATTCTCACTCTCTTATTACTGCTGCCTCATCCTCCCAACAACATTCCTTTTACAACTCCCTTGCTTCGTTTTCACAGGGAGGAGCTGGAGAAACATCAAAACGAGGCATAGATTACAAATGGAGGATTGAGAACAAAGAAGGAGTGATGGAGAAGACATTGAAGCAAGATTGGAGGAGGACGACGACGATGGAATATTATGTACATGACTGACTAATTTCTGGGGCACCACCCTTTACTTCTGCAGCTTCTCATGGCCTGGCGCTTTTCACTGGTTCGACATTTTCACTATGA 621 0.4686 MSRGGSSSSSSSRWCPTQEQLVILEEIYRGGVRTPNASQIQHITAQLSFYGKIEGKNVFYWFQNHKARDRQKLRRRLNKQLQLQQQQQQHHLCNDYYLHLHLNHNYNSHHSHSLITAASSSQQHSFYNSLASFSQGGAGETSKRGIDYKWRIENKEGVMEKTLKQDWRRTTTMEYYVHDXLISGAPPFTSAASHGLALFTGSTFSL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0345 206 SMART HOX_1 9 76 IPR001356 GO:0003677
Lele24g0345 206 CDD homeodomain 17 72 IPR001356 GO:0003677
Lele24g0345 206 FunFam WUSCHEL-related homeobox 4 11 78 - -
Lele24g0345 206 Gene3D - 5 72 - -
Lele24g0345 206 Pfam Homeodomain 11 71 IPR001356 GO:0003677
Lele24g0345 206 ProSiteProfiles 'Homeobox' domain profile. 7 72 IPR001356 GO:0003677
Lele24g0345 206 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 6 136 IPR044555 GO:0003700|GO:0099402
Lele24g0345 206 SUPERFAMILY Homeodomain-like 12 71 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0345 Lele-ChrLele24 2224603 2226446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0345 7 104 Wox Gene Family AT2G28610 51.695 1.06e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele24g0345 Homeodomain 8.7e-18 CL0123