Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0344 ATGTTCAGACACGCGGCCTCCCGGAATCCGAGTGGGATGGAGTTGGGGATTTACCTGCAAGGTGTGATCAGATTTAGACAAAAAGAACTTCACGGGCAGCTATTTGAGAACGAGCTGCAGCCAACTATGCTTCTGGACAAGAATGCCCATAGAGAAACCCTTTATGATGTTCTTAACGTGAAGGAAGATGCAAGCTATGAAGAGATCCGTGCCAGTTACCGCAGTGCTATACTCAATCTACATCCTGATAAATTATTGAAGACGTCTGAGATGTCAAGCAGTCATCAAACACCAGGAGATAGATTCCTCACTGTACAGAAGGCATGGGAAATTCTCAGCAATTCAACCTCCCGGTCAATATACGACAACGAGCTGCGAGGTTCAAGACAGGATGCATTGGCTGCAGATGTTGCAGAAGATATAAGCTTGCAGGATACGATCGTCGAACAAGCCGGAGAAGCATTGAATCTCTCTTACCAGTGCAGATGCGGTGATTACTTCGCCATAGACTCTACAGAATTAGAGAAAATGGGGTATTCATTGTTGAGGGATGGTAGTGAGATTTCTGTACGTAGTGATGATAGTTTGCCAGGTTCTGTGATTCTTCCGTGTGGATCTTGTTCTCTGAAAGTTCGTCTACTAATCAACATGGATGATAGCAAGTGA 666 0.4489 MFRHAASRNPSGMELGIYLQGVIRFRQKELHGQLFENELQPTMLLDKNAHRETLYDVLNVKEDASYEEIRASYRSAILNLHPDKLLKTSEMSSSHQTPGDRFLTVQKAWEILSNSTSRSIYDNELRGSRQDALAADVAEDISLQDTIVEQAGEALNLSYQCRCGDYFAIDSTELEKMGYSLLRDGSEISVRSDDSLPGSVILPCGSCSLKVRLLINMDDSK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0344 221 CDD DnaJ 53 114 IPR001623 -
Lele24g0344 221 FunFam DNAJ heat shock N-terminal domain-containing protein-like 131 219 - -
Lele24g0344 221 Pfam DnaJ domain 54 122 IPR001623 -
Lele24g0344 221 SUPERFAMILY Chaperone J-domain 50 126 IPR036869 -
Lele24g0344 221 PRINTS DnaJ domain signature 55 73 IPR001623 -
Lele24g0344 221 PRINTS DnaJ domain signature 73 88 IPR001623 -
Lele24g0344 221 PRINTS DnaJ domain signature 97 117 IPR001623 -
Lele24g0344 221 PANTHER DPH3 HOMOLOG-RELATED 53 220 IPR044248 GO:0017183|GO:0046872
Lele24g0344 221 Gene3D DPH Zinc finger 130 221 IPR036671 -
Lele24g0344 221 SUPERFAMILY CSL zinc finger 139 219 IPR036671 -
Lele24g0344 221 Pfam CSL zinc finger 140 214 IPR007872 -
Lele24g0344 221 Gene3D DnaJ domain 40 129 IPR036869 -
Lele24g0344 221 ProSiteProfiles dnaJ domain profile. 53 125 IPR001623 -
Lele24g0344 221 SMART dnaj_3 52 117 IPR001623 -
Lele24g0344 221 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 137 216 IPR007872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0344 Lele-ChrLele24 2213725 2214781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0344 55 122 C2H2 Transcription Factor Family AT1G74250 39.706 6.03e-09 53.5