Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0339 ATGGACCACTTGGCATTTTCACGAGTCTTCTGCATGTTCGATGCTGACGTGTCAATGCATGGTTTGCTCGGGATTCAGTCCAAGAAGGGTAAGATTTTGGCCTTAAACTCCAACTTCTTCAGTGGAGAAATCCCAAATGAGCTAAGTTATTGCATTGGCCTGAAATCTCTCTTCCTTTCAAATAATCAATCTTCGCTGGGAAAATTATCAAAACTTGAGCATTTTAGAGCAGGAGGGAACATTAACATTACTGGGAATATACCACATGAGCTGGGAAATTGCATTAATTTGATTTATTTGGGGTTGACTGAAACCAGCATATCAGGCTCTTTGCCAGCTTCGTTTGGTAGGCTTAAGAAGCTTCAAAGGCTGTCCGTTTGTGATACTATGCTTTCTGGTGAGATTCCTTCAGAGATAGGTAATTACTCGGAGCTTGTTGAGTTGAGGCCCATGCGAAAAAATCTATCAGGTTCTATTCCATCTGATATTGGGAAGCTTCAGAAGCTACAGGTTTTGAATTTATGGGATAATTCTATTGTTGGGGATATTCCTAAAGAGATTGGTAACTACACAAGCTTGAGAACGCTTAAGCTTTCTTTGAATTCTTTATCTGGGACTATCCCTTTGTCTGTGGGTAATCTTATGAAGCTTGAAAAGTTTTTGGTTGCTGAAAACAATATCTCTGGTTCTATACCTTCAAATCTTTCAAATGCCACAAATCTGAAACGATTGGAACTTTCCATGAATCAAATCTCAGGCGCAATCCCACCCGAGATAGGAAGTTGCAGCTCTCTCGAAAGGCTGAGTCTTAGAAACAATCGAATTTATGGTGAGATTCCAAAGACAATTGGTGGTTTGAAGAACTTAAATTTGTTTGATATCTCTAATAACCGACTGAACGGGTCATTGCCTGATGCCATTGGTGGCTGCTCAAAACTGGAAAAGATAAACCTCAGCAACAATGACTTAGAAGGTCAGGTACCTACAAGCTTAGGTAATCTTTCTTCCCTAATTGATCTGCAACTCAGCAGAAACAAATTCTCCGGAACTATTCCTCGATCACTTGGTCTGTGTTCAAAACTCCAAATGCTTGATCTTAGTAGCAATGAACTCACTGGAAGCATACCAAAAGAGTTAGGTGAGATCAAAACTCTTGCAGTTGTTCTTAACCTCATTCACAACTCTCTTAAAGGATCAATTCCTTCTGAAATCTCTAAATTAAACATGCTCTCCGCGATGGACATTTCACATAATATGTTGGAAGGAGGATTTTTAGACACTTATCCAGAAGAAATTAAGGGAAACAGTGGTCCTTGTTCTAGGATTCAGGATTCGTGCTTCTTAAAAGATCACTCACGCAGGGAAAAACTGACTAAAAACATGAATTCAACAATTCTTAAACTGATTATCGGGTTGCTGGTAGTCTCGATAGTGATATTTGTTGTTACAGTAATCATTTCAGTTACCAGGAGAAGAACAGTCAGAGACAATAATAATGGTTCTTCAGAGATGGGAAACACATGGAGATGGCAATTCATTCCATTTCAGAGGTTAAATTTCTCAGTTGAACAGGTACTCAGAAGCTTGGAAGACGAAAATATAATAGGAAAACGATGCTCAGGTGTTGTGCATCGTGTTGATATTGGTAATAACGAAGCCATAGCCGTAAAGAAACTGAGGACGCCTGCAGCTCCAATGGTTTCAGGTGATGGTGGACCTAATACTGATGACCCTTTCTCGAGAGAGCTGAGAATCCTGGGTTTAATCCGACATAGGAACATTAAAATTCTTGTTTGGAATGGGGAGTACAAAATCTTATTGGGTGCTGCACAAGGCCTCGAATATCTTCATCATGATACAGAACCTCCAATAGTTCACAGAGACATCAAAACCAGTAACATCCTCATTGGCCCTGAATTTGATGCTTGCATTGCTGATTTTGGCTTGGCCGAGTTTGTTGACGATTGTGGTTTCGGCAACTCCCCCAGTGCAGTCGCTGGTTCTTGGGGATACATTGCTCCTGGTCAATTCATCGGCCAGCTCAATTCAACTATAGAAAAAGATGATCGTCTTGGTGAGGTTGGAGTAGAGGGGCTTGGTGCTGCATGTGCTTGTGAAGATTCTGCAGCAGGCGCAGTCTTTGATTGGGGGAAGAACTTAAGCACAATAGGGCAATGTCTAATGCTTCCTTCATTTCTTCTATTTCTGATTCTGGTGCAGATTGTAAGGCAGGGTCTAGGGCTTCTACTTGTCCGCTCTTTTGTCTCACCCACTTAG 2277 0.4106 MDHLAFSRVFCMFDADVSMHGLLGIQSKKGKILALNSNFFSGEIPNELSYCIGLKSLFLSNNQSSLGKLSKLEHFRAGGNINITGNIPHELGNCINLIYLGLTETSISGSLPASFGRLKKLQRLSVCDTMLSGEIPSEIGNYSELVELRPMRKNLSGSIPSDIGKLQKLQVLNLWDNSIVGDIPKEIGNYTSLRTLKLSLNSLSGTIPLSVGNLMKLEKFLVAENNISGSIPSNLSNATNLKRLELSMNQISGAIPPEIGSCSSLERLSLRNNRIYGEIPKTIGGLKNLNLFDISNNRLNGSLPDAIGGCSKLEKINLSNNDLEGQVPTSLGNLSSLIDLQLSRNKFSGTIPRSLGLCSKLQMLDLSSNELTGSIPKELGEIKTLAVVLNLIHNSLKGSIPSEISKLNMLSAMDISHNMLEGGFLDTYPEEIKGNSGPCSRIQDSCFLKDHSRREKLTKNMNSTILKLIIGLLVVSIVIFVVTVIISVTRRRTVRDNNNGSSEMGNTWRWQFIPFQRLNFSVEQVLRSLEDENIIGKRCSGVVHRVDIGNNEAIAVKKLRTPAAPMVSGDGGPNTDDPFSRELRILGLIRHRNIKILVWNGEYKILLGAAQGLEYLHHDTEPPIVHRDIKTSNILIGPEFDACIADFGLAEFVDDCGFGNSPSAVAGSWGYIAPGQFIGQLNSTIEKDDRLGEVGVEGLGAACACEDSAAGAVFDWGKNLSTIGQCLMLPSFLLFLILVQIVRQGLGLLLVRSFVSPT 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0339 758 SUPERFAMILY L domain-like 31 219 - -
Lele24g0339 758 ProSiteProfiles Protein kinase domain profile. 413 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0339 758 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 330 424 - -
Lele24g0339 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Lele24g0339 758 FunFam Leucine-rich repeat receptor-like protein kinase TDR 63 329 - -
Lele24g0339 758 SUPERFAMILY Protein kinase-like (PK-like) 504 681 IPR011009 -
Lele24g0339 758 Pfam Leucine rich repeat 264 323 IPR001611 GO:0005515
Lele24g0339 758 Gene3D Phosphorylase Kinase; domain 1 514 599 - -
Lele24g0339 758 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 193 675 - -
Lele24g0339 758 Pfam Protein kinase domain 605 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0339 758 SMART serkin_6 529 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0339 758 Gene3D Ribonuclease Inhibitor 18 170 IPR032675 -
Lele24g0339 758 SUPERFAMILY RNI-like 154 426 - -
Lele24g0339 758 Gene3D Ribonuclease Inhibitor 171 449 IPR032675 -
Lele24g0339 758 Gene3D Transferase(Phosphotransferase) domain 1 600 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0339 Lele-ChrLele24 2199145 2203601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0339 36 689 Receptor kinase-like Gene Family AT5G56040 34.517 4.86e-135 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele24g0339 Pkinase 1.1e-11 CL0016