Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0330 ATGCACACCCATCCATTGGCGAATCGATTCAGGGTAAGGTTTCATCATTATCGTCGTTTTTCGGGATACGTTCTGGGTCTTCGTGTTTCGAATCGATCTAATAACTGGATTACTCAGTGTAACAAGTCCCTCTCTTCAGGTTTCGTCGGGTTCATTTTTCTTTTGACGAACTGTTTTCTCGTTCATTATATGAGTGGCTTGAACTTTGCACGTGATACTGAAGAAAATATGGAGGATATGGAGATTGATCAAATTGTCGATGTTCCTGATACTCCTGATAGATTGACTGCTAGGCATGTTGGTAAAAAATATGCCGGTAATCCTGATGTTTGTGTGAATGAGAAGGGAGAGAGGGTTCCCCGTGTTACTGAAAACAGTAAGTATGGAAGACCTTCCTTTTGTCTTTCAAAGAGCTCAAACGGTGGTGAAATGAATAACTGCATAGCGGCATCCTCATCAAATAATTCTTATGCTTCTCAAAATGCTCCCATATTAAGGAGGTCCCAAAGTGACAAATCTTTTAGTAAAGAGTTTTCATACACAGCTGGATCTGAAAAGATGGAGAAAGGGAACAATATATGCCTTAAATTTCCTTCTAAATCATCTTCTAGTAGCTATGGGGGTGTTACTGTTTTTGATTTGACTGAAGAAAATGGACAGCCCCAAAAACTCAAACCATTTTTCTCACATCATGGATTGAAGGATAATGCAACTGACTCCAAGAAAGATGGGAAAGCAAGCATTGGGAACTCTCCTATATCTTGCATCCCTGATTCTTCAAATACATCTAGCAATGCCTTACGAGGAAAGTGTAAAATAGATGATAAAACACATCTATGCTTGAATAAAACTGTTGATTGTGGAAAGAGTATTGATCTATCTGGTGATTCTCGGCCAAAAACTGAAAAGCAGGTGTCTTTGCCTCCTCGCCTTATAACCACCCCAAGAATCAGAGGGCAGAAGAGATTGGTGCGAAATGGCTGTATCTCACCTTATAATATTGCAGCTAGAGCAAAACAATCAGCTGAACAGAATGATGTTGAACAGAGCCATGCGGAGGATGATGTTTCTAGCAATACAACGTCCCACATAAGTATCAATGATATAGTTGCTGAAGAGAGAAGCAGTAACAGAGTGAAGGGAAAAGAATTATTTATCCACCCTTCAAGAGTGCATGATGCCAGAACTATCAAAACAGCTAGCAGTAGCCCTATGGATAATCATGAAGGGACCAATGGTACCAGTAATGCTATCAGAAATTCACATGAAAGCTTGGGGGGATCAGAAGGTTTGACAATAACACATAACCGCAGAACTACTCATTGGCCCTTGCATGATGTAACTGGGCATCGTTCAAGGAGAGGTGAAGATTCTGAAAGATTTATTAGCACACAATGTAGGAACAGAGTGGGTAGAAGAGACCCTGGGAGCAGTCAAAACACTATGGATGTAAGGTATCCTCTAGTAAATCATGCGACTCCTCTGATCATTCCCGATGCTGAACAGTCAACTAGACCTTGTAATACAGCAGACAAGCTGACTAAAAGGCAAAGGAAAAACGCATCAACCTCCAGAAATCTTAATCCAGAGATTATGATTCTTGATTCACCTGAGGAATCATCAAATTTAAGCTCACCTAGGAGCTCTGAAGTGGTTGAGCAATTACCTGGAACAACATACACCAACAGAGCATCCCATGATTCCGATGACATGAATCCTAGTGACTCAGACACTCGGGCTACTCAGGTAGAAGCAGATGAGATATTGGCCCGTGAACTTCAAGAACAACTATATCATGAGGATTCTTTTGATGGGGGAGAGCATATTGGTGAACATTTAGCGTGGGCATTGCAACATGAGGAGGAATTTCTGCATACATCTATGGAGAGTCACCATATATCACACCCTAGATTGTCAAGGGCAGCCTCAAATAGACAGCCTCATTCGCGGTCTCATCAAAGTCCTACAAATAGAAGGAGAGCCATGCCTCATGCCCCTCCCTCTAGTAGAGTGTCACAGTTGAGGAGTCGCTTTTTAAATCGGTCTTCAGTGCCTGCCATCCCAACCAGAGGAAGGCGTCTTCGGTTTCCTGTGGATATGGACTTTGACATGAGACTTGATATATTGGAAGCATTGGAGGATGCAGTAGGGGATATTAGTGACACGGGAATTGCTGAAGACATGTTTCAAGCTCATCGAGACTTCAATGAAAATGATTATGAAATGTTATTGGCCCTTGATGAGAACAATCATCAACATGCTGGTGCATCTGTCTATCAGATCAATAATTTGCCGCAGTCCACTATACATACTGACAACTTCCAAGAGGCGTGCGCCATATGTCTTGAGATTCCAGCTATGGGAGAAACCATTCGCCATCTTCCTTGTCTGCATAAATTTCACAAAGATTGTATTGATCCTTGGCTCCGTAGAAGGACCTCGTGCCCAGTGTGCAAGTTATCTATCACCTAA 2472 0.4199 MHTHPLANRFRVRFHHYRRFSGYVLGLRVSNRSNNWITQCNKSLSSGFVGFIFLLTNCFLVHYMSGLNFARDTEENMEDMEIDQIVDVPDTPDRLTARHVGKKYAGNPDVCVNEKGERVPRVTENSKYGRPSFCLSKSSNGGEMNNCIAASSSNNSYASQNAPILRRSQSDKSFSKEFSYTAGSEKMEKGNNICLKFPSKSSSSSYGGVTVFDLTEENGQPQKLKPFFSHHGLKDNATDSKKDGKASIGNSPISCIPDSSNTSSNALRGKCKIDDKTHLCLNKTVDCGKSIDLSGDSRPKTEKQVSLPPRLITTPRIRGQKRLVRNGCISPYNIAARAKQSAEQNDVEQSHAEDDVSSNTTSHISINDIVAEERSSNRVKGKELFIHPSRVHDARTIKTASSSPMDNHEGTNGTSNAIRNSHESLGGSEGLTITHNRRTTHWPLHDVTGHRSRRGEDSERFISTQCRNRVGRRDPGSSQNTMDVRYPLVNHATPLIIPDAEQSTRPCNTADKLTKRQRKNASTSRNLNPEIMILDSPEESSNLSSPRSSEVVEQLPGTTYTNRASHDSDDMNPSDSDTRATQVEADEILARELQEQLYHEDSFDGGEHIGEHLAWALQHEEEFLHTSMESHHISHPRLSRAASNRQPHSRSHQSPTNRRRAMPHAPPSSRVSQLRSRFLNRSSVPAIPTRGRRLRFPVDMDFDMRLDILEALEDAVGDISDTGIAEDMFQAHRDFNENDYEMLLALDENNHQHAGASVYQINNLPQSTIHTDNFQEACAICLEIPAMGETIRHLPCLHKFHKDCIDPWLRRRTSCPVCKLSIT 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0330 823 MobiDBLite consensus disorder prediction 340 365 - -
Lele24g0330 823 MobiDBLite consensus disorder prediction 227 264 - -
Lele24g0330 823 CDD mRING-H2-C3H2C2D_ZSWM2 778 819 - -
Lele24g0330 823 MobiDBLite consensus disorder prediction 495 580 - -
Lele24g0330 823 MobiDBLite consensus disorder prediction 400 462 - -
Lele24g0330 823 PANTHER SI:CH211-59O9.10 452 822 - -
Lele24g0330 823 MobiDBLite consensus disorder prediction 228 242 - -
Lele24g0330 823 FunFam RING/U-box superfamily protein 743 823 - -
Lele24g0330 823 MobiDBLite consensus disorder prediction 520 567 - -
Lele24g0330 823 MobiDBLite consensus disorder prediction 243 264 - -
Lele24g0330 823 MobiDBLite consensus disorder prediction 627 674 - -
Lele24g0330 823 MobiDBLite consensus disorder prediction 439 462 - -
Lele24g0330 823 SMART ring_2 778 818 IPR001841 -
Lele24g0330 823 MobiDBLite consensus disorder prediction 637 651 - -
Lele24g0330 823 ProSiteProfiles Zinc finger RING-type profile. 778 819 IPR001841 -
Lele24g0330 823 SUPERFAMILY RING/U-box 777 822 - -
Lele24g0330 823 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 744 823 IPR013083 -
Lele24g0330 823 Pfam Ring finger domain 777 819 IPR001841 -
Lele24g0330 823 MobiDBLite consensus disorder prediction 400 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0330 Lele-ChrLele24 2138893 2143579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0330 723 820 C3H Transcription Factor Family AT3G55530 33.588 6.38e-17 80.1