Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0295 ATGAATGGTTCTGGGAGTTTTGAGGTAGAGGACTCTGAGTTCGTTGAAGTTGATCCCACTGGAAGATATGGACGATACAACGAAATTCTTGGCAAAGGGGCTTCAAAGACAGTTTACAGAGCATTCGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTGAAGCTCTATGATTTTATGCAGAATCCTGAAGATCTTGAGAGGTTATACTGTGAAATTCATCTTCTCAAGACCTTGAAACACAAAAACATCATGAAGTTCTATACTTCCTGGGTTGATACTGCAAACAGGCATATTAACTTCGTCACTGAGATGTTCACCTCTGGCACTCTCAGACAGTACAGGTTAAAACACAAAAGAGTTAACATTAGAGCTGTGAAGCACTGGTGCAGGCAGATTTTGGAAGGGCTCCTTTATCTTCACAGTCATGGTCCTCCTGTGATCCACAGAGACCTCAAATGTGATAACATTTTCATCAATGGTAATCAAGGGGAAGTTAAAATCGGTGATCTTGGCCTTGCAGCAATTCTCCGCAAATCTAACGCTGCTCGTTGCGTCGGCACACCAGAGTTTATGGCTCCGGAAGTGTATGAAGAAGATTATAATGAATTAGTTGACATATACTCTTTTGGAATGTGCATCTTGGAGATGGTGACATTTGAATATCCTTATAGTGAATGCACTCATCCTGCTCAAATTTACAAGAAAGTTGTCTCCGGCAAGAAACCAGAGGCTCTCTACAAAGTAAAGGATCCTGAGGTTAGACAATTTGTGGAGAAATGCTTAGCAACCGTGTCTCTTAGGCTTTCCGCAAGAGAACTTCTCAAAGACCCTTTTCTGCAAATTGATGATTACTTGTCTGAGATTAAATCTCTTCGGTATCAAGGAGATTGCTATGAAGTAACCCCTTTATATAGACAACCTCTTAATGGAGTTCACACCAGTAACAACTCAATCAATGAGTACACTGATTATCTCAGTGGTTATGGACCAGAATCTGAGCTAACCAGCGAAATCGATCTCTTTGAATGCGAAGAGGATGATAATGTGGCTGAAGTTGATACTGCAATCAAAGGCACGAGAAGAGAAGATGATGGCATTTTTCTGAGACATAGAATAGCAGATAAGGAAGGTAGAGTTCGAAACATCTACTTCCCGTTCGACATCGAGACCGATACCGCTTTGAGTGTAGCAAATGAAATGGTGGCTGAGCTGGACATAACTGATCAAGACGTAACAAAAATAGCAGACATGATAGATAATGAAATAGCAAACTTGGTCCCAGAGTGGAAAACTGGACCCAGAACAGAGGAAACTCTAGAATGCACAAGTGAAAGTCTCTGCTTCAACTGTGCTTCACGTGGCAACTTCTTTGATTATGTATCTTCAAACACCCCATCAGCTAAGAAGCTACAATTTCTTCATTGTTCAAGAGACGGCTGTGCCGCCATTCATGGCCGTTTTGAGGAGATCACATACCAAGTTGAGGGGTCTGAAAATTTTACTACAGATGGTCCTCCAGCTGCTTCAACTCAATCTACTGGTGTTCACTATACTGATATATGGGCTCAGAGAGATGAGCCGGAACCAAGTTCAGAGGAGTTAAGAGACATACATAGTGACAAATCACACGAGGCTTCAAACCAATCAAAACTTGAAGATGATGAGAGAAGTAGTGTTATTGGGGATCGTCAAAGTAATCCCAACTCAAAAGACGCATTTTCTAATCAAGAATTAGCATGTGTTTTCCTGGACTATGAGAATGAAATTAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTGAGGGAGCTTAGAGACCAGCAATTAGGTGGAACAACAAAACTAACAAGCACATATTCTGACTCTGAAGAATCAGAAGAGCATAGAAAATTTGGTGGGGTCCCAAAGCTACAAGTTACAGCTCACATGAAGATACGGAACAATAAACCATTCTTGAGGCTTTTTAGCACCAGGAAGCGATTTCCGGCTGATGCAGAGAACAATAAGAACTTCTCAGCTATGGATAATATGGTGCAAGATGTAGATGAGACTAGTGGATCTGATAGTCCTGAGCTGATGGTCACAGCCAACGATTTCTATGCTGGAGATTTGCTTCCTCACTCGCTTCATAGAGCGACGTCTCTTCCGGTTGATGCAATAGATGCATAG 2184 0.4162 MNGSGSFEVEDSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFMQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRHINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILEGLLYLHSHGPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPEALYKVKDPEVRQFVEKCLATVSLRLSARELLKDPFLQIDDYLSEIKSLRYQGDCYEVTPLYRQPLNGVHTSNNSINEYTDYLSGYGPESELTSEIDLFECEEDDNVAEVDTAIKGTRREDDGIFLRHRIADKEGRVRNIYFPFDIETDTALSVANEMVAELDITDQDVTKIADMIDNEIANLVPEWKTGPRTEETLECTSESLCFNCASRGNFFDYVSSNTPSAKKLQFLHCSRDGCAAIHGRFEEITYQVEGSENFTTDGPPAASTQSTGVHYTDIWAQRDEPEPSSEELRDIHSDKSHEASNQSKLEDDERSSVIGDRQSNPNSKDAFSNQELACVFLDYENEIRQELRWLKAKYQMQLRELRDQQLGGTTKLTSTYSDSEESEEHRKFGGVPKLQVTAHMKIRNNKPFLRLFSTRKRFPADAENNKNFSAMDNMVQDVDETSGSDSPELMVTANDFYAGDLLPHSLHRATSLPVDAIDA 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0295 727 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0295 727 FunFam probable serine/threonine-protein kinase WNK9 366 450 - -
Lele24g0295 727 Gene3D - 356 433 - -
Lele24g0295 727 CDD STKc_WNK 22 281 - -
Lele24g0295 727 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Lele24g0295 727 MobiDBLite consensus disorder prediction 525 573 - -
Lele24g0295 727 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 626 - -
Lele24g0295 727 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Lele24g0295 727 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0295 727 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Lele24g0295 727 Gene3D Transferase(Phosphotransferase) domain 1 107 287 - -
Lele24g0295 727 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 380 424 IPR024678 GO:0004674|GO:0005524
Lele24g0295 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lele24g0295 727 MobiDBLite consensus disorder prediction 525 562 - -
Lele24g0295 727 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0295 727 Coils Coil 592 612 - -
Lele24g0295 727 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0295 Lele-ChrLele24 1896106 1898920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0295 1 617 MAP Kinase Kinase Kinase AT3G22420 52.519 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele24g0295 Pkinase 3.6e-50 CL0016